RNA id: TU213576



Basic Information


Item Value
RNA id TU213576
length 204
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G188312
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 78652440 ~ 78652643 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggtacaggaaggCAGGCCGGCTCAGGGTCatgggcaggcagagtggtcaggcgggtgggttcagggtcaggacaggcaagggtcaaaaaccaggagggcgagaaaaagagaggctgggaaaaaacaggagctgacaggacaaaagctggtaagcttgacaaacaagatgaactggcaacagacaaacagagaacacagctataa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU213560 lncRNA upstream 7298 78644795 ~ 78645142 (+) True G188296
TU213557 lncRNA upstream 10275 78641874 ~ 78642165 (+) True G188293
TU213553 lncRNA upstream 12240 78639982 ~ 78640200 (+) True G188289
TU213551 lncRNA upstream 13096 78639119 ~ 78639344 (+) True G188287
TU213546 lncRNA upstream 17862 78634345 ~ 78634578 (+) True G188282
TU213577 lncRNA downstream 508 78653151 ~ 78653357 (+) True G188313
TU213594 lncRNA downstream 13655 78666298 ~ 78666528 (+) True G188328
TU213605 lncRNA downstream 18702 78671345 ~ 78671646 (+) True G188339
TU213635 lncRNA downstream 40250 78692893 ~ 78693158 (+) True G188369
TU213640 lncRNA downstream 52062 78704705 ~ 78704989 (+) True G188374
XM_021573061.2 mRNA upstream 72250 78578149 ~ 78580190 (+) False LOC110497055
XM_036956316.1 mRNA upstream 95172 78537027 ~ 78557268 (+) False LOC110502110
XR_005039456.1 mRNA downstream 278780 78931423 ~ 78931476 (+) True LOC118944149
XM_021573107.2 mRNA downstream 450931 79103574 ~ 79151359 (+) False LOC110497132
XM_021573108.2 mRNA downstream 450931 79103574 ~ 79151359 (+) True LOC110497132
XM_021573109.2 mRNA downstream 524385 79177028 ~ 79235909 (+) False LOC110497158
XM_021573111.2 mRNA downstream 524387 79177030 ~ 79235909 (+) True LOC110497158
TU213267 other upstream 72378 78579372 ~ 78580062 (+) True LOC110497055
TU213209 other upstream 145508 78484824 ~ 78506932 (+) True LOC110496993
TU212466 other upstream 382395 78267289 ~ 78270045 (+) True G187320
TU212400 other upstream 474857 78137513 ~ 78177583 (+) True G187260
TU212345 other upstream 603640 78047887 ~ 78048800 (+) False LOC110502077
TU216437 other downstream 2102498 80755141 ~ 80756647 (+) True G191052
TU216442 other downstream 2112689 80765332 ~ 80766714 (+) False G191057
TU216443 other downstream 2113089 80765732 ~ 80766714 (+) True G191057
TU216622 other downstream 2412911 81065554 ~ 81068564 (+) False LOC110497314
TU216621 other downstream 2415977 81068620 ~ 81070875 (+) True LOC110497314

Expression Profile