RNA id: TU225155



Basic Information


Item Value
RNA id TU225155
length 306
lncRNA type antisense_over
GC content 0.50
exon number 2
gene id G198900
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87289012 ~ 87301865 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TCCTCTTTGGCTACCCCATTAGacctttccccttctccagctctTCTCACCTTGCAGTTGAACATGTCTGCGATGCGGGCCAGGGGAGCGTGGCCCGCTTTGTGCCGGACAAGGACGTACACAGCCTTGACTCCAGGGCAGGACCGCATCAGCTTCTCCAGCAGGACTTTTCCCATAAAGCCTGTGGCCCCTGTGATCAGCACATTCTTCCCCTCATAGTACTCAGGAATGGTCACCATTTTGTATGTGTGCTCCAACCTTCCTCAACAACGCCACCTTGCGCATCTTTTCCGTGGCATGCTGTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU224872 lncRNA downstream 12837 87267989 ~ 87276175 (-) True G198658
TU224910 lncRNA downstream 65634 87222452 ~ 87223378 (-) True G198676
TU224760 lncRNA downstream 155776 87133019 ~ 87133236 (-) True G198562
TU224750 lncRNA downstream 165913 87122743 ~ 87123099 (-) True G198552
TU224745 lncRNA downstream 175391 87113422 ~ 87113621 (-) True G198547
TU225163 lncRNA upstream 69 87301934 ~ 87302148 (-) True G198908
TU225164 lncRNA upstream 328 87302193 ~ 87302446 (-) True G198909
TU225178 lncRNA upstream 935 87302800 ~ 87303618 (-) True G198917
TU225183 lncRNA upstream 7725 87309590 ~ 87309905 (-) True G198922
TU225186 lncRNA upstream 9995 87311860 ~ 87312168 (-) True G198925
XM_036958150.1 mRNA downstream 29409 87170110 ~ 87259603 (-) False mical2b
XM_021575471.2 mRNA downstream 29411 87170110 ~ 87259601 (-) False mical2b
XM_036958151.1 mRNA downstream 29411 87170110 ~ 87259601 (-) False mical2b
XM_036958157.1 mRNA downstream 29412 87195674 ~ 87259600 (-) False mical2b
XM_036958159.1 mRNA downstream 29413 87198705 ~ 87259599 (-) False mical2b
XM_021575564.2 mRNA upstream 62385 87364250 ~ 87366299 (-) True LOC110498882
XM_036958262.1 mRNA upstream 64298 87366163 ~ 87404994 (-) False ppfibp2b
XM_036958240.1 mRNA upstream 64298 87366163 ~ 87492584 (-) False ppfibp2b
XM_036958254.1 mRNA upstream 64298 87366163 ~ 87492584 (-) False ppfibp2b
XM_036958244.1 mRNA upstream 65427 87367292 ~ 87492584 (-) False ppfibp2b
TU224521 other downstream 385056 86903036 ~ 86903956 (-) True G198342
TU223618 other downstream 1325347 85959845 ~ 85963665 (-) True G197554
TU223542 other downstream 1445519 85836299 ~ 85843493 (-) False G197498
TU225173 other upstream 20274 87322139 ~ 87326469 (-) True G198912
TU228163 other upstream 2304972 89606837 ~ 89609890 (-) True LOC110499346
TU228979 other upstream 3075692 90377557 ~ 90441425 (-) True G202279
TU230773 other upstream 4287347 91589212 ~ 91591049 (-) True G203915
TU230896 other upstream 4485322 91787187 ~ 91788103 (-) True G204024

Expression Profile