Item | Value |
---|---|
RNA id | TU224978 |
length | 681 |
lncRNA type | inter_gene |
GC content | 0.42 |
exon number | 1 |
gene id | G198737 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 87359524 ~ 87360204 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU224963 | lncRNA | upstream | 19286 | 87339982 ~ 87340238 (+) | True | G198728 |
TU224946 | lncRNA | upstream | 33079 | 87325580 ~ 87326445 (+) | True | G198711 |
TU224945 | lncRNA | upstream | 34021 | 87324493 ~ 87325503 (+) | True | G198710 |
TU224956 | lncRNA | upstream | 39644 | 87319588 ~ 87319880 (+) | True | G198721 |
TU224952 | lncRNA | upstream | 55264 | 87304061 ~ 87304260 (+) | True | G198717 |
TU224981 | lncRNA | downstream | 10343 | 87370547 ~ 87372391 (+) | True | G198739 |
TU225025 | lncRNA | downstream | 138090 | 87498294 ~ 87499092 (+) | True | G198782 |
TU225026 | lncRNA | downstream | 139643 | 87499847 ~ 87500124 (+) | True | G198783 |
TU225063 | lncRNA | downstream | 184175 | 87544379 ~ 87544579 (+) | True | G198820 |
TU225064 | lncRNA | downstream | 184583 | 87544787 ~ 87545152 (+) | True | G198821 |
XM_036958231.1 | mRNA | upstream | 5821 | 87351440 ~ 87353703 (+) | True | LOC118942948 |
XM_036958218.1 | mRNA | upstream | 8325 | 87345598 ~ 87351199 (+) | True | LOC110498866 |
XR_005038646.1 | mRNA | upstream | 17633 | 87340910 ~ 87341891 (+) | True | LOC118942946 |
XM_036934754.1 | mRNA | upstream | 20967 | 87335797 ~ 87338557 (+) | True | LOC118937298 |
XM_021575520.2 | mRNA | upstream | 35938 | 87288762 ~ 87323586 (+) | False | far1 |
XM_021575680.2 | mRNA | downstream | 552328 | 87912532 ~ 87931639 (+) | False | LOC110498941 |
XM_021575688.2 | mRNA | downstream | 558923 | 87919127 ~ 87931457 (+) | True | LOC110498941 |
XM_036990369.1 | mRNA | downstream | 586269 | 87946473 ~ 87966277 (+) | False | wt-t1b |
XM_036990367.1 | mRNA | downstream | 586271 | 87946475 ~ 87966277 (+) | False | wt-t1b |
XM_036990377.1 | mRNA | downstream | 586272 | 87946476 ~ 87966277 (+) | False | wt-t1b |
TU224773 | other | upstream | 209034 | 87150202 ~ 87150490 (+) | True | G198575 |
TU224599 | other | upstream | 320288 | 87037511 ~ 87039236 (+) | True | G198417 |
TU223067 | other | upstream | 1222916 | 86135616 ~ 86136608 (+) | True | G197069 |
TU222039 | other | upstream | 2339490 | 85010464 ~ 85020034 (+) | True | LOC110498034 |
TU220995 | other | upstream | 2759200 | 84596410 ~ 84600324 (+) | True | G195155 |
TU225027 | other | downstream | 133419 | 87493623 ~ 87496735 (+) | True | G198784 |
TU225054 | other | downstream | 175732 | 87535936 ~ 87536928 (+) | True | G198811 |
TU225538 | other | downstream | 506673 | 87866877 ~ 87867967 (+) | True | G199223 |
TU227536 | other | downstream | 2059565 | 89419769 ~ 89422438 (+) | True | LOC110499234 |
TU228729 | other | downstream | 3086914 | 90447118 ~ 90447573 (+) | True | G202039 |