RNA id: TU225361



Basic Information


Item Value
RNA id TU225361
length 452
lncRNA type intronic
GC content 0.41
exon number 2
gene id G199063
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 87663786 ~ 87664315 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GGAGTAATAAAGCCCTACTTCACACAGGAGTAATAAAGCCCTATTTCACACAGGAGTAATAAAGCCCTATTTCACACAGGAGTAATAAAGCTCTACTTCACACAGGAGTAATAAAGCCCTATTTCACACAGGAGTAATAAAGCCCTACTTCACACAGGAGTAATAAAGCCCTACTTCACACAGGAGTAATAAAGCCCTAGTTCACACAGGAGTAATAAAGCCCTACTTCACACAGGAGTAATAAAGCCCTAGTTCACACAGGAGTAATAAAGCCCTAGTTCACACAGGAGTAATAAAGCCCTACTTCACACAGGAGTAATAAAGCCCTACTTCACACAGGAGTAATAAAGCCCTATTTCACACAGGAGTAATAAAGCCCTACTTCACACAGGAGTAATAAAGCCCTACTTCACACAGGAGTAATAAAGCCTTACTTCACACAGGAGTAATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU225296 lncRNA downstream 111903 87551655 ~ 87551883 (-) True G199006
TU225295 lncRNA downstream 114993 87548572 ~ 87548793 (-) True G199005
TU225294 lncRNA downstream 115448 87548116 ~ 87548338 (-) True G199004
TU225241 lncRNA downstream 163506 87499554 ~ 87500280 (-) True G198974
TU225242 lncRNA downstream 165196 87497115 ~ 87498590 (-) True G198975
TU225389 lncRNA upstream 33989 87698304 ~ 87698579 (-) True G199086
TU225395 lncRNA upstream 40553 87704868 ~ 87705091 (-) True G199092
TU225396 lncRNA upstream 41296 87705611 ~ 87705989 (-) True G199093
TU225599 lncRNA upstream 56745 87721060 ~ 87721568 (-) True G199267
TU225664 lncRNA upstream 163865 87828180 ~ 87831241 (-) True G199329
XM_021575590.2 mRNA downstream 120041 87518920 ~ 87543745 (-) True syt9b
XM_021575577.2 mRNA downstream 167041 87492601 ~ 87496745 (-) True olfml1
XM_036958244.1 mRNA downstream 171202 87367292 ~ 87492584 (-) False ppfibp2b
XM_021575622.2 mRNA upstream 137747 87802062 ~ 87854858 (-) False kiaa1549la
XM_021575632.2 mRNA upstream 137747 87802062 ~ 87854858 (-) False kiaa1549la
XM_021575642.2 mRNA upstream 137747 87802062 ~ 87854858 (-) False kiaa1549la
XM_036958314.1 mRNA upstream 137747 87802062 ~ 87854859 (-) True kiaa1549la
XM_036958353.1 mRNA upstream 195042 87859357 ~ 87900421 (-) False LOC110498926
TU225173 other downstream 337317 87322139 ~ 87326469 (-) True G198912
TU224521 other downstream 759830 86903036 ~ 86903956 (-) True G198342
TU223618 other downstream 1700121 85959845 ~ 85963665 (-) True G197554
TU223547 other downstream 1820293 85836299 ~ 85843493 (-) False G197498
TU228163 other upstream 1942522 89606837 ~ 89609890 (-) True LOC110499346
TU228979 other upstream 2713242 90377557 ~ 90441425 (-) True G202279
TU230773 other upstream 3924897 91589212 ~ 91591049 (-) True G203915
TU230896 other upstream 4122872 91787187 ~ 91788103 (-) True G204024
TU231426 other upstream 4733745 92398060 ~ 92439601 (-) False LOC110499897

Expression Profile