Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU228730 |
| length | 565 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G202040 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 90447890 ~ 90448454 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU228728 | lncRNA | upstream | 2328 | 90445270 ~ 90445562 (+) | True | G202038 |
| TU228727 | lncRNA | upstream | 3407 | 90444194 ~ 90444483 (+) | True | G202037 |
| TU228725 | lncRNA | upstream | 5745 | 90441841 ~ 90442145 (+) | True | G202035 |
| TU228696 | lncRNA | upstream | 15375 | 90411585 ~ 90432515 (+) | True | G202007 |
| TU228648 | lncRNA | upstream | 107332 | 90338158 ~ 90340558 (+) | True | G201968 |
| TU228731 | lncRNA | downstream | 1578 | 90450032 ~ 90450237 (+) | True | G202041 |
| TU228742 | lncRNA | downstream | 23626 | 90472080 ~ 90472306 (+) | True | G202052 |
| TU228745 | lncRNA | downstream | 29974 | 90478428 ~ 90478647 (+) | True | G202055 |
| TU228747 | lncRNA | downstream | 34512 | 90482966 ~ 90483208 (+) | True | G202057 |
| TU228874 | lncRNA | downstream | 260122 | 90708576 ~ 90708831 (+) | True | G202180 |
| XM_021576610.2 | mRNA | upstream | 250954 | 90183281 ~ 90196936 (+) | True | wnt2 |
| XM_036958742.1 | mRNA | upstream | 277775 | 90130540 ~ 90170115 (+) | False | asz1 |
| XM_036958738.1 | mRNA | upstream | 277775 | 90132005 ~ 90170115 (+) | False | asz1 |
| XM_036958735.1 | mRNA | upstream | 277775 | 90138677 ~ 90170115 (+) | True | asz1 |
| XM_036958730.1 | mRNA | upstream | 404066 | 89937149 ~ 90043824 (+) | True | LOC110502295 |
| XM_036958868.1 | mRNA | downstream | 129466 | 90577920 ~ 90594338 (+) | False | cpa5 |
| XM_021576668.2 | mRNA | downstream | 130447 | 90578901 ~ 90594338 (+) | False | cpa5 |
| XM_021576659.2 | mRNA | downstream | 130448 | 90578902 ~ 90594338 (+) | True | cpa5 |
| XM_021576675.2 | mRNA | downstream | 145996 | 90594450 ~ 90599294 (+) | True | LOC110499537 |
| XM_021576649.2 | mRNA | downstream | 158636 | 90607090 ~ 90667412 (+) | True | poc1b |
| TU228729 | other | upstream | 317 | 90447118 ~ 90447573 (+) | True | G202039 |
| TU227536 | other | upstream | 1025452 | 89419769 ~ 89422438 (+) | True | LOC110499234 |
| TU225538 | other | upstream | 2579923 | 87866877 ~ 87867967 (+) | True | G199223 |
| TU225054 | other | upstream | 2910962 | 87535936 ~ 87536928 (+) | True | G198811 |
| TU225027 | other | upstream | 2951155 | 87493623 ~ 87496735 (+) | True | G198784 |
| TU228879 | other | downstream | 268488 | 90716942 ~ 90717421 (+) | True | G202185 |
| TU229614 | other | downstream | 788571 | 91237025 ~ 91237991 (+) | False | LOC110499641 |
| TU230045 | other | downstream | 917883 | 91366337 ~ 91539373 (+) | True | mgat4c |
| TU230224 | other | downstream | 1173547 | 91622001 ~ 91624293 (+) | True | G203414 |
| TU230248 | other | downstream | 1220382 | 91668836 ~ 91671899 (+) | True | G203438 |
