RNA id: TU233136



Basic Information


Item Value
RNA id TU233136
length 278
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G206011
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93446807 ~ 93447084 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gttctctaaggcggctcatttcattccccttgctaagcttccttctgctaaagagacggcacaaatcatcatcgagaatgttttcagaattcatggccttccgtcagacgtcgtttcggacagaggtccacaattcacgtctcaattttggagggagttttgccgtttgattggggcttccgtcagtctctcttccggctttcacccccagtctaacggtcaagcagaacgggccaatcagactattggtcgcatcttacgcagtctttcttttcgca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU233135 lncRNA downstream 805 93445402 ~ 93446002 (-) True G206010
TU233118 lncRNA downstream 21887 93424703 ~ 93424920 (-) True G205993
TU233069 lncRNA downstream 59598 93385989 ~ 93387209 (-) True G205946
TU233054 lncRNA downstream 130392 93316177 ~ 93316415 (-) True G205932
TU233041 lncRNA downstream 144004 93302124 ~ 93302803 (-) True G205919
TU233137 lncRNA upstream 3237 93450321 ~ 93450530 (-) True G206012
TU233155 lncRNA upstream 27349 93474433 ~ 93475406 (-) True G206030
TU233156 lncRNA upstream 28406 93475490 ~ 93475719 (-) True G206031
TU233164 lncRNA upstream 40676 93487760 ~ 93487979 (-) True G206039
TU233203 lncRNA upstream 102271 93549355 ~ 93549733 (-) True G206075
XM_021577074.2 mRNA downstream 73855 93337897 ~ 93372952 (-) True LOC110499982
XM_036934431.1 mRNA downstream 246907 93176310 ~ 93199900 (-) True LOC118936876
XR_005038829.1 mRNA downstream 356342 93087261 ~ 93090465 (-) False LOC110499968
XM_036959225.1 mRNA downstream 565509 92869846 ~ 92881298 (-) True LOC110499952
LOC110499887 mRNA downstream 1018073 92427643 ~ 92428734 (-) True LOC110499887
XM_021577085.2 mRNA upstream 29977 93477061 ~ 93606905 (-) True LOC110499989
XM_036959302.1 mRNA upstream 312559 93759643 ~ 93890433 (-) False LOC110502409
XM_036959293.1 mRNA upstream 312559 93759643 ~ 93925168 (-) True LOC110502409
XM_036959320.1 mRNA upstream 487331 93934415 ~ 94040658 (-) False LOC110499999
XM_036959326.1 mRNA upstream 487331 93934415 ~ 94085908 (-) False LOC110499999
TU232213 other downstream 483873 92962044 ~ 92962934 (-) True G205192
TU231426 other downstream 1007206 92398060 ~ 92439601 (-) False LOC110499897
TU230896 other downstream 1658704 91787187 ~ 91788103 (-) True G204024
TU230773 other downstream 1855758 91589212 ~ 91591049 (-) True G203915
TU228979 other downstream 3005382 90377557 ~ 90441425 (-) True G202279
TU234006 other upstream 865340 94312424 ~ 94312774 (-) False G206742
TU234005 other upstream 865443 94312527 ~ 94312774 (-) True G206742
TU234008 other upstream 866306 94313390 ~ 94313918 (-) True G206744
TU234014 other upstream 880826 94327910 ~ 94328183 (-) True G206750
TU234576 other upstream 1169831 94616915 ~ 94617232 (-) True G207244

Expression Profile