RNA id: TU233137



Basic Information


Item Value
RNA id TU233137
length 210
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G206012
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93450321 ~ 93450530 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctgtctttgtcggattcttgtttgtgttgttcatgcctgaaccagactatcgtcatgtttgctgcaaccttgtcctgtcctgtcggaatctgccggtccatctgagcctacgtttgttttgctattaaagaagctctgtttacgttaagtcgcttttgggtcctcattcacgcaccgtaacagaagaatccgaccaagaatggacccagc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU233136 lncRNA downstream 3237 93446807 ~ 93447084 (-) True G206011
TU233135 lncRNA downstream 4319 93445402 ~ 93446002 (-) True G206010
TU233118 lncRNA downstream 25401 93424703 ~ 93424920 (-) True G205993
TU233069 lncRNA downstream 63112 93385989 ~ 93387209 (-) True G205946
TU233054 lncRNA downstream 133906 93316177 ~ 93316415 (-) True G205932
TU233155 lncRNA upstream 23903 93474433 ~ 93475406 (-) True G206030
TU233156 lncRNA upstream 24960 93475490 ~ 93475719 (-) True G206031
TU233164 lncRNA upstream 37230 93487760 ~ 93487979 (-) True G206039
TU233203 lncRNA upstream 98825 93549355 ~ 93549733 (-) True G206075
TU233226 lncRNA upstream 145617 93596147 ~ 93596355 (-) True G206097
XM_021577074.2 mRNA downstream 77369 93337897 ~ 93372952 (-) True LOC110499982
XM_036934431.1 mRNA downstream 250421 93176310 ~ 93199900 (-) True LOC118936876
XR_005038829.1 mRNA downstream 359856 93087261 ~ 93090465 (-) False LOC110499968
XM_036959225.1 mRNA downstream 569023 92869846 ~ 92881298 (-) True LOC110499952
LOC110499887 mRNA downstream 1021587 92427643 ~ 92428734 (-) True LOC110499887
XM_021577085.2 mRNA upstream 26531 93477061 ~ 93606905 (-) True LOC110499989
XM_036959302.1 mRNA upstream 309113 93759643 ~ 93890433 (-) False LOC110502409
XM_036959293.1 mRNA upstream 309113 93759643 ~ 93925168 (-) True LOC110502409
XM_036959320.1 mRNA upstream 483885 93934415 ~ 94040658 (-) False LOC110499999
XM_036959326.1 mRNA upstream 483885 93934415 ~ 94085908 (-) False LOC110499999
TU232213 other downstream 487387 92962044 ~ 92962934 (-) True G205192
TU231426 other downstream 1010720 92398060 ~ 92439601 (-) False LOC110499897
TU230896 other downstream 1662218 91787187 ~ 91788103 (-) True G204024
TU230773 other downstream 1859272 91589212 ~ 91591049 (-) True G203915
TU228979 other downstream 3008896 90377557 ~ 90441425 (-) True G202279
TU234006 other upstream 861894 94312424 ~ 94312774 (-) False G206742
TU234005 other upstream 861997 94312527 ~ 94312774 (-) True G206742
TU234008 other upstream 862860 94313390 ~ 94313918 (-) True G206744
TU234014 other upstream 877380 94327910 ~ 94328183 (-) True G206750
TU234576 other upstream 1166385 94616915 ~ 94617232 (-) True G207244

Expression Profile