RNA id: TU232766


Basic Information

Item Value
RNA id TU232766
length 211
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G205665
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93757319 ~ 93757529 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cctctctctgcaactggatcctggacttcctgacacgCCGTCCCCAGGTGAtgaggataggcaacaacacatccgctgaccatcaacatgggggcccctcaggggtgcatgctcagtcccctcctgtactccctgttcacccacgactagaTGGTcgcacacgactccaacaccatcattaagtttgcagatgacacaacagtgataggcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU232751 lncRNA upstream 31316 93725559 ~ 93726003 (+) True G205650
TU232691 lncRNA upstream 142580 93614493 ~ 93614739 (+) True G205599
TU232686 lncRNA upstream 153804 93603240 ~ 93603515 (+) True G205594
TU232678 lncRNA upstream 163567 93593474 ~ 93593752 (+) True G205586
TU232675 lncRNA upstream 166812 93590041 ~ 93590507 (+) True G205583
TU232786 lncRNA downstream 38922 93796451 ~ 93798214 (+) True G205684
TU232810 lncRNA downstream 75986 93833515 ~ 93835840 (+) True G205706
TU232827 lncRNA downstream 99132 93856661 ~ 93925170 (+) True G205722
TU232835 lncRNA downstream 113333 93870862 ~ 93876863 (+) False G205728
TU232834 lncRNA downstream 118455 93875984 ~ 93876863 (+) True G205728
XM_036934451.1 mRNA upstream 35557 93716089 ~ 93721762 (+) True LOC118936881
XM_036934440.1 mRNA upstream 133234 93623033 ~ 93624085 (+) True LOC118936880
XM_036959279.1 mRNA upstream 380414 93373307 ~ 93376905 (+) True LOC110502396
XM_021577061.2 mRNA upstream 421801 93270955 ~ 93335518 (+) False LOC110499974
XM_021577124.2 mRNA downstream 388134 94145663 ~ 94149467 (+) False LOC110500011
XM_036959470.1 mRNA downstream 388224 94145753 ~ 94149467 (+) True LOC110500011
XM_036959421.1 mRNA downstream 392902 94150431 ~ 94172796 (+) False dnm1l
XM_036959424.1 mRNA downstream 392902 94150431 ~ 94172796 (+) False dnm1l
XM_036959430.1 mRNA downstream 392903 94150432 ~ 94172796 (+) False dnm1l
TU232556 other upstream 355085 93401617 ~ 93402234 (+) True G205482
TU232439 other upstream 368769 93371393 ~ 93388550 (+) False G205404
TU232785 other downstream 38553 93796082 ~ 93798936 (+) True G205683
TU232791 other downstream 52831 93810360 ~ 93812169 (+) True G205688
TU233428 other downstream 182957 93940486 ~ 93941471 (+) True G206285
TU233546 other downstream 343450 94100979 ~ 94101872 (+) False G206389
TU233547 other downstream 343450 94100979 ~ 94101872 (+) False G206389

Expression Profile