RNA id: TU233760



Basic Information


Item Value
RNA id TU233760
length 492
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G206563
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93932287 ~ 93932778 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTTCTAATTGTTTTGGGTTCTAATTGTTTTGTGTTCTAATTGTTTTGGGTTCTAATTGTTTTGTGTTCTAATTGTTTTGTGTTCTAattgttttgtgttctacttgttttgtgttctacttgtTTTGTGTTCCAATTGTTTTGTGTTCCAATTGTTTTGTGTTCCAattgttttgtgttctacttgttttgtgttctacttgtTTTGTGTTCCAattgttttgtgttctacttgttttgtgttctacttgttttgtgttctacttgtTTTGTGTTGTACTTGTTTTGTGTTCCAATTGTTTTGTGTTCTAattgttttgtgttctacttgtTCTGTGTTCTACTTGTAGCCATGGTTGGCCTGAAAATACCATGTTAAACCACTTAATTGTGAGTCTAAATATAAGAGATGGACATGGAGATAAATGAAAGTCAGATAAATGGAAAGTCAATTTTTGCTGGCGTCTCATGATTGATTTAATCATCATAATGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU233381 lncRNA downstream 50793 93879956 ~ 93881494 (-) True G206249
TU233378 lncRNA downstream 53151 93878155 ~ 93879136 (-) True G206247
TU233366 lncRNA downstream 80551 93850896 ~ 93851736 (-) True G206235
TU233346 lncRNA downstream 111702 93820151 ~ 93820585 (-) True G206215
TU233322 lncRNA downstream 173017 93759058 ~ 93759270 (-) True G206192
TU233761 lncRNA upstream 1642 93934420 ~ 93939947 (-) False G206564
TU233770 lncRNA upstream 1642 93934420 ~ 93939947 (-) False G206564
TU233783 lncRNA upstream 1642 93934420 ~ 93939947 (-) False G206564
TU233785 lncRNA upstream 1642 93934420 ~ 93939947 (-) False G206564
TU233786 lncRNA upstream 1642 93934420 ~ 93939947 (-) False G206564
XM_036959293.1 mRNA downstream 7119 93759643 ~ 93925168 (-) True LOC110502409
XM_036959302.1 mRNA downstream 41854 93759643 ~ 93890433 (-) False LOC110502409
XM_021577085.2 mRNA downstream 325382 93477061 ~ 93606905 (-) True LOC110499989
XM_021577074.2 mRNA downstream 559335 93337897 ~ 93372952 (-) True LOC110499982
XM_036934431.1 mRNA downstream 732387 93176310 ~ 93199900 (-) True LOC118936876
XM_036959320.1 mRNA upstream 1637 93934415 ~ 94040658 (-) False LOC110499999
XM_036959326.1 mRNA upstream 1637 93934415 ~ 94085908 (-) False LOC110499999
XM_036959311.1 mRNA upstream 1637 93934415 ~ 94085913 (-) False LOC110499999
XM_036959332.1 mRNA upstream 1637 93934415 ~ 94085913 (-) False LOC110499999
XM_036959340.1 mRNA upstream 1637 93934415 ~ 94085913 (-) False LOC110499999
TU232213 other downstream 969353 92962044 ~ 92962934 (-) True G205192
TU231426 other downstream 1492686 92398060 ~ 92439601 (-) False LOC110499897
TU230896 other downstream 2144184 91787187 ~ 91788103 (-) True G204024
TU230773 other downstream 2341238 91589212 ~ 91591049 (-) True G203915
TU228979 other downstream 3490862 90377557 ~ 90441425 (-) True G202279
TU234006 other upstream 379646 94312424 ~ 94312774 (-) False G206742
TU234005 other upstream 379749 94312527 ~ 94312774 (-) True G206742
TU234008 other upstream 380612 94313390 ~ 94313918 (-) True G206744
TU234014 other upstream 395132 94327910 ~ 94328183 (-) True G206750
TU234576 other upstream 684137 94616915 ~ 94617232 (-) True G207244

Expression Profile