RNA id: TU234006



Basic Information


Item Value
RNA id TU234006
length 351
RNA type TUCP
GC content 0.52
exon number 1
gene id G206742
representative False

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94312424 ~ 94312774 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CGAAGAGGCTCTGTGGTTCAGGGGTCATGGGCCAGTCGGGTCCCCCTCTAGGCGTGTTTGGGAAGGGGGGCAGGCCAGACGGGATAGGGTTGGGTTGTCTGAAGTTACTGTTGTCTGAGAACAGCGACTGGGACTCTGCAGCAGCTCCCTCGAAGGGAGAGCGGGCGGTGAGATCCACTACACTGATAGGAACCACCAGACTGCTCGGGGGTCTGGTCAGCcccggaggagaggagggggactcACTGTTAGGCAtctggagagggggggggggggacattggTAATGTCTGTGACAATGTAACATTTGTAAGAAATAAATCAGCTATATTTGAAATGGCCCAGAAGAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU234004 lncRNA downstream 254 94311888 ~ 94312170 (-) True G206741
TU234001 lncRNA downstream 3232 94308970 ~ 94309192 (-) True G206738
TU234000 lncRNA downstream 3917 94308154 ~ 94308507 (-) True G206737
TU233988 lncRNA downstream 21137 94284127 ~ 94291287 (-) True G206725
TU233985 lncRNA downstream 38968 94273132 ~ 94273456 (-) True G206722
TU234009 lncRNA upstream 1566 94314340 ~ 94314585 (-) True G206745
TU234007 lncRNA upstream 2292 94315066 ~ 94317648 (-) True G206743
TU234012 lncRNA upstream 8948 94321722 ~ 94322292 (-) True G206748
TU234015 lncRNA upstream 16327 94329101 ~ 94329351 (-) True G206751
TU234023 lncRNA upstream 25256 94338030 ~ 94338266 (-) True G206756
XM_021577224.2 mRNA downstream 53591 94251418 ~ 94258833 (-) True LOC110500075
XM_021577199.2 mRNA downstream 68858 94232734 ~ 94243566 (-) True LOC110500060
XM_021577212.2 mRNA downstream 82879 94222366 ~ 94229545 (-) True LOC110500065
XM_036959490.1 mRNA downstream 91278 94188205 ~ 94221146 (-) False LOC110500043
XM_036959482.1 mRNA downstream 91317 94188205 ~ 94221107 (-) False LOC110500043
XM_021577304.2 mRNA upstream 35744 94348518 ~ 94359922 (-) False LOC110500125
XM_021577316.2 mRNA upstream 51241 94364015 ~ 94367194 (-) True LOC110500132
XM_021577348.2 mRNA upstream 99470 94412244 ~ 94416157 (-) False LOC110500153
XM_021577355.2 mRNA upstream 99470 94412244 ~ 94417008 (-) True LOC110500153
XM_021577457.2 mRNA upstream 213774 94526548 ~ 94529606 (-) False LOC110500221
TU232213 other downstream 1349490 92962044 ~ 92962934 (-) True G205192
TU231426 other downstream 1872823 92398060 ~ 92439601 (-) False LOC110499897
TU230896 other downstream 2524321 91787187 ~ 91788103 (-) True G204024
TU230773 other downstream 2721375 91589212 ~ 91591049 (-) True G203915
TU228979 other downstream 3870999 90377557 ~ 90441425 (-) True G202279
TU234008 other upstream 616 94313390 ~ 94313918 (-) True G206744
TU234014 other upstream 15136 94327910 ~ 94328183 (-) True G206750
TU234576 other upstream 304141 94616915 ~ 94617232 (-) True G207244
TU234581 other upstream 316663 94629437 ~ 94629739 (-) True G207249
TU234691 other upstream 449888 94762662 ~ 94776356 (-) True G207340

Expression Profile