RNA id: TU234023



Basic Information


Item Value
RNA id TU234023
length 237
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G206756
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94338030 ~ 94338266 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ttccacttcacattaacagcacttacagttgaccggggcagctctagcaaggcagaaatctgacaaactgacttgttggaaaggtggcatcctatggcggtaccacattgaaagtcaatgagctcttcagtaaagccattctattgccaatgtttgtctatggagatcgcatggcggtgtgctcaattttatacatctgtcagcaatgggtgtgacggaaatagccgaatccactca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU234015 lncRNA downstream 8679 94329101 ~ 94329351 (-) True G206751
TU234012 lncRNA downstream 15738 94321722 ~ 94322292 (-) True G206748
TU234007 lncRNA downstream 20382 94315066 ~ 94317648 (-) True G206743
TU234009 lncRNA downstream 23445 94314340 ~ 94314585 (-) True G206745
TU234004 lncRNA downstream 25860 94311888 ~ 94312170 (-) True G206741
TU234020 lncRNA upstream 10473 94348739 ~ 94350164 (-) False LOC110500125
TU234018 lncRNA upstream 12744 94351010 ~ 94355227 (-) True LOC110500125
TU234028 lncRNA upstream 24244 94362510 ~ 94362759 (-) True G206761
TU234040 lncRNA upstream 46852 94385118 ~ 94385353 (-) True G206773
TU234095 lncRNA upstream 144128 94482394 ~ 94482692 (-) True G206827
XM_021577224.2 mRNA downstream 79197 94251418 ~ 94258833 (-) True LOC110500075
XM_021577199.2 mRNA downstream 94464 94232734 ~ 94243566 (-) True LOC110500060
XM_021577212.2 mRNA downstream 108485 94222366 ~ 94229545 (-) True LOC110500065
XM_036959490.1 mRNA downstream 116884 94188205 ~ 94221146 (-) False LOC110500043
XM_036959482.1 mRNA downstream 116923 94188205 ~ 94221107 (-) False LOC110500043
XM_021577304.2 mRNA upstream 10252 94348518 ~ 94359922 (-) False LOC110500125
XM_021577316.2 mRNA upstream 25749 94364015 ~ 94367194 (-) True LOC110500132
XM_021577348.2 mRNA upstream 73978 94412244 ~ 94416157 (-) False LOC110500153
XM_021577355.2 mRNA upstream 73978 94412244 ~ 94417008 (-) True LOC110500153
XM_021577457.2 mRNA upstream 188282 94526548 ~ 94529606 (-) False LOC110500221
TU234014 other downstream 9847 94327910 ~ 94328183 (-) True G206750
TU234008 other downstream 24112 94313390 ~ 94313918 (-) True G206744
TU234006 other downstream 25256 94312424 ~ 94312774 (-) False G206742
TU234005 other downstream 25256 94312527 ~ 94312774 (-) True G206742
TU232213 other downstream 1375096 92962044 ~ 92962934 (-) True G205192
TU234576 other upstream 278649 94616915 ~ 94617232 (-) True G207244
TU234581 other upstream 291171 94629437 ~ 94629739 (-) True G207249
TU234691 other upstream 424396 94762662 ~ 94776356 (-) True G207340
TU235317 other upstream 1039457 95377723 ~ 95408714 (-) True G207858
TU235447 other upstream 1185702 95523968 ~ 95524227 (-) True G207959

Expression Profile