RNA id: TU234531



Basic Information


Item Value
RNA id TU234531
length 263
lncRNA type antisense_over
GC content 0.51
exon number 2
gene id G207205
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94555524 ~ 94555822 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATTTGTGTACCCAAGAACCATATTGTGCGCTCTCTTTAACATCAGTACCAGCCTCTAGCCTGTACTGGGTCAGGACATGGGCTCCTCATTCTACCTCTGACCCTctcgggggggaagggatggtgGAGCAGGAGTGTCTTCAGCTGTGGTGGTcatggtctcagaacagttcaACTGGTTTTTGGTGCGTCTCGATGGCTGATGGCGTTCAGCTCCTGTCCCTCTAGTTAAACAGTAACGCCATTGGTGAAAAATTAGGCTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU234520 lncRNA downstream 32557 94522087 ~ 94522967 (-) True G207194
TU234518 lncRNA downstream 37293 94517576 ~ 94518231 (-) True G207192
TU234111 lncRNA downstream 51368 94501893 ~ 94504156 (-) True G206843
TU234107 lncRNA downstream 55709 94498987 ~ 94499815 (-) True G206839
TU234102 lncRNA downstream 64828 94490408 ~ 94490696 (-) True G206834
TU234552 lncRNA upstream 25376 94581198 ~ 94581807 (-) True G207225
TU234553 lncRNA upstream 26102 94581924 ~ 94582416 (-) True G207226
TU234554 lncRNA upstream 26609 94582431 ~ 94582734 (-) True G207227
TU234583 lncRNA upstream 77125 94632947 ~ 94633168 (-) True G207251
TU234587 lncRNA upstream 79583 94635405 ~ 94635726 (-) True G207255
XM_021577466.2 mRNA downstream 25916 94526548 ~ 94529608 (-) True LOC110500221
XM_021577457.2 mRNA downstream 25918 94526548 ~ 94529606 (-) False LOC110500221
XM_021577355.2 mRNA downstream 138516 94412244 ~ 94417008 (-) True LOC110500153
XM_021577348.2 mRNA downstream 139367 94412244 ~ 94416157 (-) False LOC110500153
XM_021577316.2 mRNA downstream 188330 94364015 ~ 94367194 (-) True LOC110500132
XM_036959632.1 mRNA upstream 48222 94604044 ~ 94611301 (-) False asb13b
XM_021577491.2 mRNA upstream 48222 94604044 ~ 94611792 (-) True asb13b
XM_021577587.2 mRNA upstream 110106 94665928 ~ 94686791 (-) False LOC110500283
XM_021577580.2 mRNA upstream 110106 94665928 ~ 94686821 (-) True LOC110500283
XR_005039106.1 mRNA upstream 221736 94777558 ~ 94781361 (-) False LOC110500320
TU234014 other downstream 227341 94327910 ~ 94328183 (-) True G206750
TU234008 other downstream 241606 94313390 ~ 94313918 (-) True G206744
TU234006 other downstream 242750 94312424 ~ 94312774 (-) False G206742
TU234005 other downstream 242750 94312527 ~ 94312774 (-) True G206742
TU232213 other downstream 1592590 92962044 ~ 92962934 (-) True G205192
TU234576 other upstream 61093 94616915 ~ 94617232 (-) True G207244
TU234581 other upstream 73615 94629437 ~ 94629739 (-) True G207249
TU234691 other upstream 206840 94762662 ~ 94776356 (-) True G207340
TU235317 other upstream 821901 95377723 ~ 95408714 (-) True G207858
TU235447 other upstream 968146 95523968 ~ 95524227 (-) True G207959

Expression Profile