RNA id: TU234182



Basic Information


Item Value
RNA id TU234182
length 351
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G206910
representative True

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94634196 ~ 94634546 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gctgtattAGCTgatgtgtagtgttgagtcatccacatacatagaaactctggctttactcaaagtcagtggcatgtcgttagtaaaaattgaaaaaagcaaggggcctaaacagctaccctggggaattcctgattctaactggattatatttgataggcttccattaaagaacaccctctgctagacaagtaactctttatccacattatagcagggggtgtaaagccataacacataactttttccagcagcaggctataatcaataatgtcaaaagctgcattgaagtctaacaagacagcccccacaataattttatcatcaatttctctcagccaatcatcagtc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU234181 lncRNA upstream 1434 94632563 ~ 94632762 (+) True G206909
TU234174 lncRNA upstream 8819 94625157 ~ 94625377 (+) True G206902
TU234171 lncRNA upstream 17193 94616741 ~ 94617003 (+) True G206899
TU234168 lncRNA upstream 20799 94613113 ~ 94613397 (+) True G206896
TU234121 lncRNA upstream 70302 94562973 ~ 94563894 (+) True G206851
TU234157 lncRNA downstream 3627 94638173 ~ 94643168 (+) True LOC110500246
TU234195 lncRNA downstream 67963 94702509 ~ 94702767 (+) True G206921
TU234201 lncRNA downstream 71772 94706318 ~ 94706532 (+) True G206927
TU234210 lncRNA downstream 82302 94716848 ~ 94717065 (+) True G206931
TU234212 lncRNA downstream 84493 94719039 ~ 94719258 (+) True G206933
XM_036959631.1 mRNA upstream 31560 94588535 ~ 94602636 (+) True LOC110500230
XM_021577408.2 mRNA upstream 77811 94541967 ~ 94556385 (+) False LOC110500196
XM_021577415.2 mRNA upstream 77811 94541967 ~ 94556385 (+) False LOC110500196
XM_021577424.2 mRNA upstream 77811 94541967 ~ 94556385 (+) False LOC110500196
XM_036959628.1 mRNA upstream 92234 94529708 ~ 94541962 (+) True LOC110500215
XM_021577527.2 mRNA downstream 3585 94638131 ~ 94665869 (+) False LOC110500246
XM_021577502.2 mRNA downstream 3611 94638157 ~ 94665869 (+) False LOC110500246
XM_021577517.2 mRNA downstream 3611 94638157 ~ 94665869 (+) False LOC110500246
XM_021577546.2 mRNA downstream 3611 94638157 ~ 94665869 (+) False LOC110500246
XM_021577554.2 mRNA downstream 3611 94638157 ~ 94665869 (+) False LOC110500246
TU234180 other upstream 1929 94631829 ~ 94632267 (+) True G206908
TU234120 other upstream 71972 94557169 ~ 94562224 (+) True G206850
TU233702 other upstream 196514 94402591 ~ 94437682 (+) True LOC110500139
TU233552 other upstream 532324 94100979 ~ 94101872 (+) False G206389
TU234200 other downstream 71400 94705946 ~ 94706248 (+) True G206926
TU235944 other downstream 1593247 96227793 ~ 96228463 (+) True G208404
TU236415 other downstream 1977883 96612429 ~ 96613459 (+) True G208836
TU237298 other downstream 2851930 97486476 ~ 97486772 (+) True G209586
TU237326 other downstream 2984071 97618617 ~ 97619089 (+) False G209591

Expression Profile