RNA id: TU237288


Basic Information

Item Value
RNA id TU237288
length 459
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G209576
representative True

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 97470268 ~ 97470726 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATTCCAATCACCTTAAAGATACATTCCAATCACCTTAAAGATACATTCCAATCACCTTAAAGATACATTCCAATCACCTTAAAGATACATTCCAATCACCATAAAGATACATTCCAATCACCATAAAGATACATTCCAATCACCATAAAGATACATTCCAATCACCATCAAGATACATTCCAATCACCATAAAGATACATTCCAATCACCATAAAGATACATTCCAATCACCATAAAGATACATTCCAATCACCTTAAAGATACATTCCAATCACCTTAAAGATACATTCCAATCACCTTAAAGATACATTCCAATCACCTTAAAGATACATTCCAATCACCATAAAGATACATTCCAATCACCATAAAGATACATTCCAATCACCATAAAGATACATTCCAATCACCATCAAGATACATTCCAATCACCTTAAAGATACATTCCAATCACCTTAAAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU237279 lncRNA downstream 38384 97431631 ~ 97431884 (-) True G209567
TU237277 lncRNA downstream 45921 97423748 ~ 97424347 (-) True G209565
TU237275 lncRNA downstream 46955 97423036 ~ 97423313 (-) True G209563
TU237271 lncRNA downstream 55353 97414616 ~ 97414915 (-) True G209559
TU237255 lncRNA downstream 70266 97395763 ~ 97400002 (-) True G209548
TU237291 lncRNA upstream 1908 97472634 ~ 97472873 (-) True G209579
TU237295 lncRNA upstream 5069 97475795 ~ 97476167 (-) True G209583
TU237297 lncRNA upstream 9841 97480567 ~ 97480771 (-) True G209585
TU237300 lncRNA upstream 18989 97489715 ~ 97489950 (-) True G209588
TU237604 lncRNA upstream 20501 97491227 ~ 97563923 (-) True G209799
XM_036960153.1 mRNA downstream 82315 97089207 ~ 97387953 (-) False LOC110502515
XM_036960120.1 mRNA downstream 392368 97019591 ~ 97077900 (-) False pik3c2g
XM_036960127.1 mRNA downstream 392368 97028186 ~ 97077900 (-) True pik3c2g
XM_036960115.1 mRNA downstream 573195 96647130 ~ 96897073 (-) False LOC110500541
XM_036934797.1 mRNA upstream 23618 97494344 ~ 97496498 (-) True LOC118937309
LOC118944190 mRNA upstream 151280 97622006 ~ 97622184 (-) False LOC118944190
LOC118944213 mRNA upstream 155055 97625781 ~ 97625897 (-) True LOC118944213
XR_005039512.1 mRNA upstream 177135 97647861 ~ 97648048 (-) True LOC118944196
XM_036960269.1 mRNA upstream 181480 97652206 ~ 97689832 (-) False LOC118943865
TU237272 other downstream 53080 97416821 ~ 97417188 (-) True G209560
TU236221 other downstream 1048044 96421866 ~ 96422224 (-) True G208658
TU236021 other downstream 1335796 96134077 ~ 96134472 (-) True G208472
TU235579 other downstream 1637906 95829374 ~ 95832362 (-) True G208077
TU235346 other downstream 1783404 95682623 ~ 95686864 (-) True G207876
TU237607 other upstream 30446 97501172 ~ 97502394 (-) True G209802
TU237655 other upstream 148133 97618859 ~ 97619212 (-) True G209841
TU238041 other upstream 673594 98144320 ~ 98145517 (-) True LOC118936884
TU238753 other upstream 1447722 98918448 ~ 98946069 (-) True LOC118943885
TU238756 other upstream 1471748 98942474 ~ 98943797 (-) True LOC118943882

Expression Profile