Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU239310 |
| length | 204 |
| lncRNA type | intronic |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G211108 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 99099110 ~ 99099313 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU239309 | lncRNA | downstream | 2892 | 99095938 ~ 99096218 (-) | True | G211107 |
| TU239308 | lncRNA | downstream | 3749 | 99095099 ~ 99095361 (-) | True | G211106 |
| TU238865 | lncRNA | downstream | 80668 | 99018147 ~ 99018442 (-) | True | G210760 |
| TU238862 | lncRNA | downstream | 82139 | 99016713 ~ 99016971 (-) | True | G210757 |
| TU238843 | lncRNA | downstream | 135001 | 98963751 ~ 98964109 (-) | True | G210738 |
| TU239316 | lncRNA | upstream | 9101 | 99108414 ~ 99108639 (-) | True | G211114 |
| TU239322 | lncRNA | upstream | 16536 | 99115849 ~ 99116078 (-) | True | G211120 |
| TU239323 | lncRNA | upstream | 16818 | 99116131 ~ 99116384 (-) | True | G211121 |
| TU239327 | lncRNA | upstream | 21686 | 99120999 ~ 99121208 (-) | True | G211125 |
| TU239332 | lncRNA | upstream | 25739 | 99125052 ~ 99125370 (-) | True | G211128 |
| XM_021578338.2 | mRNA | downstream | 85733 | 98997411 ~ 99013377 (-) | True | LOC110500795 |
| XM_021578332.2 | mRNA | downstream | 85969 | 98997411 ~ 99013141 (-) | False | LOC110500795 |
| XM_036960597.1 | mRNA | downstream | 102936 | 98974844 ~ 98996174 (-) | True | ctdspl2a |
| XM_036960604.1 | mRNA | downstream | 103260 | 98974844 ~ 98995850 (-) | False | ctdspl2a |
| XM_036960590.1 | mRNA | downstream | 103264 | 98974844 ~ 98995846 (-) | False | ctdspl2a |
| XR_005039228.1 | mRNA | upstream | 54946 | 99154259 ~ 99166351 (-) | False | galk2 |
| XM_036960690.1 | mRNA | upstream | 54947 | 99154260 ~ 99165018 (-) | False | galk2 |
| XM_036960677.1 | mRNA | upstream | 54947 | 99154260 ~ 99166352 (-) | True | galk2 |
| XM_036960758.1 | mRNA | upstream | 122537 | 99221850 ~ 99375962 (-) | False | tjp1b |
| XM_036960728.1 | mRNA | upstream | 122537 | 99221850 ~ 99503454 (-) | False | tjp1b |
| TU238870 | other | downstream | 72992 | 99025732 ~ 99026118 (-) | True | G210765 |
| TU238753 | other | downstream | 153041 | 98918448 ~ 98946069 (-) | True | LOC118943885 |
| TU238756 | other | downstream | 155313 | 98942474 ~ 98943797 (-) | True | LOC118943882 |
| TU238041 | other | downstream | 953593 | 98144320 ~ 98145517 (-) | True | LOC118936884 |
| TU237655 | other | downstream | 1479898 | 97618859 ~ 97619212 (-) | True | G209841 |
| TU239331 | other | upstream | 23920 | 99123233 ~ 99123658 (-) | True | G211127 |
| TU239562 | other | upstream | 516363 | 99615676 ~ 99615914 (-) | True | LOC118936886 |
| TU239603 | other | upstream | 611388 | 99710701 ~ 99713563 (-) | False | LOC110502568 |
| TU239696 | other | upstream | 757000 | 99856313 ~ 99857855 (-) | True | G211402 |
| TU239747 | other | upstream | 860244 | 99959557 ~ 99963474 (-) | True | G211447 |
