Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246186 |
| length | 260 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 2 |
| gene id | LOC110506602 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2243487 ~ 2249509 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246200 | lncRNA | downstream | 5484 | 2241730 ~ 2242295 (-) | True | G216188 |
| TU246199 | lncRNA | downstream | 6110 | 2240840 ~ 2241669 (-) | True | G216187 |
| TU246197 | lncRNA | downstream | 8341 | 2238671 ~ 2239438 (-) | True | G216185 |
| TU246198 | lncRNA | downstream | 10079 | 2237129 ~ 2237700 (-) | True | G216186 |
| TU246196 | lncRNA | downstream | 11973 | 2234742 ~ 2235806 (-) | True | G216184 |
| TU246211 | lncRNA | upstream | 18370 | 2267715 ~ 2270831 (-) | True | G216199 |
| TU246214 | lncRNA | upstream | 27516 | 2276861 ~ 2278197 (-) | True | G216200 |
| TU246218 | lncRNA | upstream | 29951 | 2279296 ~ 2284314 (-) | True | G216202 |
| TU246248 | lncRNA | upstream | 53601 | 2302946 ~ 2303148 (-) | True | G216216 |
| TU246249 | lncRNA | upstream | 55030 | 2304375 ~ 2304578 (-) | True | G216217 |
| XM_036964001.1 | mRNA | downstream | 18341 | 2225818 ~ 2229438 (-) | False | LOC118944471 |
| XM_036964010.1 | mRNA | downstream | 18341 | 2225818 ~ 2229438 (-) | True | LOC118944471 |
| XM_021581645.2 | mRNA | downstream | 52353 | 2193797 ~ 2195426 (-) | True | LOC118936266 |
| XR_005040067.1 | mRNA | downstream | 57238 | 2174258 ~ 2190541 (-) | False | LOC118944769 |
| XM_036965532.1 | mRNA | downstream | 294416 | 1916571 ~ 1953363 (-) | False | LOC110516567 |
| XM_021586374.2 | mRNA | upstream | 36949 | 2286294 ~ 2289546 (-) | False | sp8b |
| XM_021586367.2 | mRNA | upstream | 36949 | 2286294 ~ 2289553 (-) | False | sp8b |
| XM_036965672.1 | mRNA | upstream | 36949 | 2286294 ~ 2292006 (-) | True | sp8b |
| XR_005040075.1 | mRNA | upstream | 104938 | 2354283 ~ 2388299 (-) | True | LOC118944775 |
| XM_036965683.1 | mRNA | upstream | 211818 | 2461163 ~ 2507159 (-) | False | LOC118944776 |
| TU246045 | other | downstream | 122427 | 2124176 ~ 2125352 (-) | True | G216059 |
| TU246052 | other | downstream | 125922 | 2121203 ~ 2121857 (-) | True | G216066 |
| TU246015 | other | downstream | 189350 | 2057915 ~ 2058429 (-) | True | G216038 |
| TU245915 | other | downstream | 295191 | 1926744 ~ 1952588 (-) | True | LOC110516567 |
| TU245913 | other | downstream | 584712 | 1661689 ~ 1663067 (-) | False | LOC110519742 |
| TU246996 | other | upstream | 487516 | 2736861 ~ 2738467 (-) | True | G216811 |
| TU247125 | other | upstream | 796660 | 3046005 ~ 3059744 (-) | True | G216902 |
| TU247540 | other | upstream | 1088841 | 3338186 ~ 3338580 (-) | True | G217261 |
| TU247757 | other | upstream | 1437057 | 3686402 ~ 3689304 (-) | True | G217459 |
| TU248501 | other | upstream | 2189751 | 4439096 ~ 4440061 (-) | False | G218073 |
