RNA id: XM_036965873.1


Basic Information

Item Value
RNA id XM_036965873.1
length 1430
RNA type mRNA
GC content 0.45
exon number 9
gene id LOC110520730
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 3091532 ~ 3098159 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ACACTCTGCCTGTACACAACACACCCACCTTTTGCACACGGATTTCATAACCTTTGACCAAGGGAAAGAGTTTGTCTGCCATGAAGTGGGTGCTTGTTACCATCTGCATTGCTGCATTGGCAGCTCTTTTGGGGCAAAGACTTCTTAAATTGAGTGAAATAGCCCTTGCCAACAGAGAAGTGCCTGTAAAACGCCTCCCCAACTGTCACCTATTAAAGAATATAGAATATGGAGCAGAGGACTTCACCATACTTCGAGATGGACTGGCCATCATAAGCACCGGCTTGAAATATCCTGGAATGCCCTCCTTCTCTGATGACCCAGGGAAGATCTATACCCTGGACCTGTTGGACCCCAGACTGATCCCTGTGGAGCTGACAATCAAAGGAGACCTGGACCGGGACTCCTTCAACCCCCATGGAATCAGTGTCTACATTGACGAGACAGATAAAACCATCTATCTGTTTGTTGTCAATCACCCTCAACATTACACGAGCCAGGTAGAGATCTTTCTATTTGTCGAAGAGGACAACACCATTGTGCACCTGAAAACTATAAAGCATGATCTCCTTCATAGTGTGAATGACATTGTGGCTGTGGGAGTGGAGAGCTTCTATGCCACCAACGATCACTCCTATCCCAGTGCAGTGCTACACATGCTGGCTGTGTTCCTGGGTCTACCCTGGGCCGACGTGGTTTACTACAGCCCTGGAGGAGTGAAGGCAGTGGGCGATGGCTTCCTATCTGCTAACGGCATCAACATGTCACCCGACAAAAGGTATCTATACGTGTCTGCTATTTTGGACCATGAGATTGCTGTTTTTGagataaagaaaaacaaagacttGGTACATGTCAAGTCTGTAGCCGTTGGGTCTCTCTGTGACAACATCGAGGTGGACCATGTAACAGGTGACCTATGGCTGGGTTGTCACCCTAATGGAGCAAAGGTAGCAGTATATGACCCTGAGGATCTACCTGGATCTGAGGTCATTAGGATTCAGGACATCCACTATGAGAAGCCAGTGGTGACTCAGGTCTATGCTGATGATGGCAGTGTGCTCATAGGATCCTCTGTAGCAGCTCCCTATGAAGGAAAGCTTCTCATAGGAACAGTCTACCACAAAGCCCTGGTCTGTGATCTGAAGTAGCCAATGATTCCTTCCAGACATCTGATTTCcaaagtctgtgtgtgtatatatagatgcAGTAATGACACTCAAACTGTATTGTTCTcaaagtctgtgtgtgtatatatagatgcAGTAATGACACTCAAACTGTATTGTTCTCAAAGTCTGTGCTGTTTCTGTATAGTACATCTTGTCTGGTGTAATATGATTGAAAAGTATAAATATTCCACATGGTTGCCACAATATAACACTGCAATTGCTGTGATGCATGGCATGTGTAATTATGTTAAATGATAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0004064 arylesterase activity molecular_function

KEGG:

id description
K01045 PON; arylesterase / paraoxonase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU247174 lncRNA downstream 2990 3088309 ~ 3088542 (-) True G216946
TU247173 lncRNA downstream 3303 3087808 ~ 3088229 (-) True G216945
TU247172 lncRNA downstream 4730 3086178 ~ 3086802 (-) True G216944
TU247170 lncRNA downstream 9426 3081892 ~ 3082106 (-) True G216942
TU247165 lncRNA downstream 17102 3073998 ~ 3074430 (-) True G216938
TU247129 lncRNA upstream 5987 3104146 ~ 3105065 (-) False LOC110506763
TU247139 lncRNA upstream 7136 3105295 ~ 3123981 (-) True LOC110506763
TU247184 lncRNA upstream 33636 3131795 ~ 3132019 (-) True G216956
TU247193 lncRNA upstream 53464 3151623 ~ 3151936 (-) True G216964
TU247194 lncRNA upstream 53933 3152092 ~ 3153128 (-) True LOC110506836
XM_021586648.2 mRNA downstream 15029 3058329 ~ 3076503 (-) True LOC110506785
XM_036965793.1 mRNA downstream 32767 3022808 ~ 3058765 (-) False LOC110506699
XM_036965795.1 mRNA downstream 32767 3022808 ~ 3058765 (-) False LOC110506699
XM_036965802.1 mRNA downstream 32767 3022808 ~ 3058765 (-) False LOC110506699
XM_036965808.1 mRNA downstream 32767 3022808 ~ 3058765 (-) False LOC110506699
XM_036975426.1 mRNA upstream 1109 3099268 ~ 3106240 (-) False LOC110506763
XM_036965874.1 mRNA upstream 8412 3106571 ~ 3120111 (-) True LOC118936609
XM_021586699.2 mRNA upstream 53850 3152009 ~ 3162923 (-) False LOC110506836
XR_005040124.1 mRNA upstream 139316 3237475 ~ 3238019 (-) True LOC118944808
XM_036966049.1 mRNA upstream 523663 3621822 ~ 3625093 (-) False LOC110507312
TU247125 other downstream 31788 3046005 ~ 3059744 (-) True G216902
TU246996 other downstream 353065 2736861 ~ 2738467 (-) True G216811
TU246045 other downstream 966180 2124176 ~ 2125352 (-) True G216059
TU246052 other downstream 969675 2121203 ~ 2121857 (-) True G216066
TU246015 other downstream 1033103 2057915 ~ 2058429 (-) True G216038
TU247540 other upstream 240027 3338186 ~ 3338580 (-) True G217261
TU247757 other upstream 588243 3686402 ~ 3689304 (-) True G217459
TU248501 other upstream 1340937 4439096 ~ 4440061 (-) False G218073
TU248502 other upstream 1340937 4439096 ~ 4440437 (-) True G218073
TU249887 other upstream 1440503 4538662 ~ 4540441 (-) True LOC118944829

Expression Profile