Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036967709.1 |
| length | 482 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC110520886 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 8265080 ~ 8266671 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU252457 | lncRNA | upstream | 51040 | 8211659 ~ 8214241 (+) | True | G221232 |
| TU252489 | lncRNA | upstream | 87223 | 8175717 ~ 8178058 (+) | True | LOC110520790 |
| TU252486 | lncRNA | upstream | 93058 | 8171963 ~ 8172223 (+) | False | LOC110520790 |
| TU252494 | lncRNA | upstream | 101265 | 8163294 ~ 8164016 (+) | True | G221262 |
| TU252467 | lncRNA | upstream | 145205 | 8119629 ~ 8120076 (+) | True | G221242 |
| TU252575 | lncRNA | downstream | 16962 | 8283633 ~ 8328759 (+) | True | G221306 |
| TU252580 | lncRNA | downstream | 47159 | 8313830 ~ 8314890 (+) | False | LOC118945294 |
| TU252574 | lncRNA | downstream | 60530 | 8327201 ~ 8328604 (+) | True | LOC118945294 |
| TU252648 | lncRNA | downstream | 150449 | 8417120 ~ 8417804 (+) | True | LOC110520859 |
| TU252687 | lncRNA | downstream | 212631 | 8479302 ~ 8480109 (+) | False | G221394 |
| XM_021598324.2 | mRNA | upstream | 11118 | 8249753 ~ 8254163 (+) | True | krtcap2 |
| XM_021598321.2 | mRNA | upstream | 15628 | 8245228 ~ 8249653 (+) | False | LOC110520877 |
| XM_021598322.2 | mRNA | upstream | 15628 | 8245228 ~ 8249653 (+) | True | LOC110520877 |
| XM_036967655.1 | mRNA | upstream | 89023 | 8170634 ~ 8176258 (+) | False | LOC110520790 |
| XM_036967642.1 | mRNA | upstream | 105885 | 8148407 ~ 8159396 (+) | True | efna1b |
| XM_021598335.2 | mRNA | downstream | 21294 | 8287965 ~ 8291009 (+) | True | LOC110520887 |
| XR_005040410.1 | mRNA | downstream | 47119 | 8313790 ~ 8328225 (+) | False | LOC118945294 |
| XM_036967704.1 | mRNA | downstream | 62476 | 8329147 ~ 8331744 (+) | True | LOC118936617 |
| XM_021598332.2 | mRNA | downstream | 78767 | 8345438 ~ 8350294 (+) | True | s100w |
| XM_036967731.1 | mRNA | downstream | 132366 | 8399037 ~ 8401940 (+) | True | LOC110520890 |
| TU252485 | other | upstream | 93058 | 8170707 ~ 8172223 (+) | False | LOC110520790 |
| TU251574 | other | upstream | 817404 | 7446369 ~ 7447877 (+) | True | LOC118945274 |
| TU251531 | other | upstream | 883718 | 7378258 ~ 7381563 (+) | False | G220445 |
| TU251520 | other | upstream | 899996 | 7363298 ~ 7365285 (+) | False | G220435 |
| TU252560 | other | downstream | 132400 | 8399071 ~ 8489067 (+) | False | G221299 |
| TU252562 | other | downstream | 132400 | 8399071 ~ 8489067 (+) | False | G221299 |
| TU252563 | other | downstream | 132400 | 8399071 ~ 8411530 (+) | True | G221299 |
| TU252829 | other | downstream | 462306 | 8728977 ~ 8732478 (+) | False | G221514 |
| TU252831 | other | downstream | 462306 | 8728977 ~ 8731107 (+) | True | G221514 |
