Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021598335.2 |
| length | 473 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 3 |
| gene id | LOC110520887 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 8287965 ~ 8291009 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU252457 | lncRNA | upstream | 73724 | 8211659 ~ 8214241 (+) | True | G221232 |
| TU252489 | lncRNA | upstream | 109907 | 8175717 ~ 8178058 (+) | True | LOC110520790 |
| TU252486 | lncRNA | upstream | 115742 | 8171963 ~ 8172223 (+) | False | LOC110520790 |
| TU252494 | lncRNA | upstream | 123949 | 8163294 ~ 8164016 (+) | True | G221262 |
| TU252467 | lncRNA | upstream | 167889 | 8119629 ~ 8120076 (+) | True | G221242 |
| TU252580 | lncRNA | downstream | 22821 | 8313830 ~ 8314890 (+) | False | LOC118945294 |
| TU252574 | lncRNA | downstream | 36192 | 8327201 ~ 8328604 (+) | True | LOC118945294 |
| TU252648 | lncRNA | downstream | 126111 | 8417120 ~ 8417804 (+) | True | LOC110520859 |
| TU252687 | lncRNA | downstream | 188293 | 8479302 ~ 8480109 (+) | False | G221394 |
| TU252688 | lncRNA | downstream | 188657 | 8479666 ~ 8480109 (+) | True | G221394 |
| XM_021598333.2 | mRNA | upstream | 21294 | 8265080 ~ 8266671 (+) | False | LOC110520886 |
| XM_036967709.1 | mRNA | upstream | 21294 | 8265281 ~ 8266671 (+) | True | LOC110520886 |
| XM_021598324.2 | mRNA | upstream | 33802 | 8249753 ~ 8254163 (+) | True | krtcap2 |
| XM_021598321.2 | mRNA | upstream | 38312 | 8245228 ~ 8249653 (+) | False | LOC110520877 |
| XM_021598322.2 | mRNA | upstream | 38312 | 8245228 ~ 8249653 (+) | True | LOC110520877 |
| XR_005040410.1 | mRNA | downstream | 22781 | 8313790 ~ 8328225 (+) | False | LOC118945294 |
| XM_036967704.1 | mRNA | downstream | 38138 | 8329147 ~ 8331744 (+) | True | LOC118936617 |
| XM_021598332.2 | mRNA | downstream | 54429 | 8345438 ~ 8350294 (+) | True | s100w |
| XM_036967731.1 | mRNA | downstream | 108028 | 8399037 ~ 8401940 (+) | True | LOC110520890 |
| NM_001165171.1 | mRNA | downstream | 117012 | 8408021 ~ 8410803 (+) | True | s10i |
| TU252485 | other | upstream | 115742 | 8170707 ~ 8172223 (+) | False | LOC110520790 |
| TU251574 | other | upstream | 840088 | 7446369 ~ 7447877 (+) | True | LOC118945274 |
| TU251531 | other | upstream | 906402 | 7378258 ~ 7381563 (+) | False | G220445 |
| TU251520 | other | upstream | 922680 | 7363298 ~ 7365285 (+) | False | G220435 |
| TU252560 | other | downstream | 108062 | 8399071 ~ 8489067 (+) | False | G221299 |
| TU252562 | other | downstream | 108062 | 8399071 ~ 8489067 (+) | False | G221299 |
| TU252563 | other | downstream | 108062 | 8399071 ~ 8411530 (+) | True | G221299 |
| TU252829 | other | downstream | 437968 | 8728977 ~ 8732478 (+) | False | G221514 |
| TU252831 | other | downstream | 437968 | 8728977 ~ 8731107 (+) | True | G221514 |
