Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036967848.1 |
| length | 3041 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 7 |
| gene id | LOC110520870 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 8703710 ~ 8714435 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0035767 | endothelial cell chemotaxis | biological_process |
| GO:0032869 | cellular response to insulin stimulus | biological_process |
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0070830 | bicellular tight junction assembly | biological_process |
| GO:0001525 | angiogenesis | biological_process |
| GO:0044795 | trans-Golgi network to recycling endosome transport | biological_process |
| GO:0010737 | protein kinase A signaling | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0032456 | endocytic recycling | biological_process |
| GO:1902463 | protein localization to cell leading edge | biological_process |
| GO:0030866 | cortical actin cytoskeleton organization | biological_process |
| GO:0031175 | neuron projection development | biological_process |
| GO:0032593 | insulin-responsive compartment | cellular_component |
| GO:0030139 | endocytic vesicle | cellular_component |
| GO:0043005 | neuron projection | cellular_component |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0005802 | trans-Golgi network | cellular_component |
| GO:0055038 | recycling endosome membrane | cellular_component |
| GO:0005923 | bicellular tight junction | cellular_component |
| GO:0030027 | lamellipodium | cellular_component |
| GO:0016328 | lateral plasma membrane | cellular_component |
| GO:0030658 | transport vesicle membrane | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K06109 | RAB13; Ras-related protein Rab-13 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU252779 | lncRNA | upstream | 520 | 8699031 ~ 8703190 (+) | True | LOC110520846 |
| TU252777 | lncRNA | upstream | 4120 | 8699031 ~ 8699590 (+) | False | LOC110520846 |
| TU252814 | lncRNA | upstream | 24912 | 8678496 ~ 8678798 (+) | True | G221499 |
| TU252742 | lncRNA | upstream | 34195 | 8573930 ~ 8669515 (+) | True | G221441 |
| TU252786 | lncRNA | downstream | 49539 | 8763974 ~ 8766590 (+) | True | LOC110520796 |
| TU252784 | lncRNA | downstream | 86075 | 8800510 ~ 8801779 (+) | True | G221469 |
| TU252873 | lncRNA | downstream | 107695 | 8822130 ~ 8825071 (+) | True | G221545 |
| TU252872 | lncRNA | downstream | 108689 | 8823124 ~ 8823805 (+) | True | G221544 |
| TU252874 | lncRNA | downstream | 111615 | 8826050 ~ 8826757 (+) | True | G221546 |
| XM_021598276.2 | mRNA | upstream | 4550 | 8686537 ~ 8699160 (+) | False | LOC110520846 |
| XM_036967855.1 | mRNA | upstream | 18927 | 8680513 ~ 8684783 (+) | True | LOC110520797 |
| XM_036967830.1 | mRNA | upstream | 46027 | 8639044 ~ 8657683 (+) | True | LOC110520861 |
| XM_021598313.2 | mRNA | upstream | 66344 | 8631406 ~ 8637366 (+) | True | LOC110520869 |
| XM_036967821.1 | mRNA | upstream | 75238 | 8532941 ~ 8628472 (+) | True | LOC110520896 |
| XM_036967901.1 | mRNA | downstream | 1561 | 8715996 ~ 8764972 (+) | False | LOC110520796 |
| XM_021598291.2 | mRNA | downstream | 53342 | 8767777 ~ 8771883 (+) | False | LOC110520852 |
| XR_005040446.1 | mRNA | downstream | 53342 | 8767777 ~ 8771883 (+) | True | LOC110520852 |
| XM_036967881.1 | mRNA | downstream | 57901 | 8772336 ~ 8800464 (+) | False | LOC110520836 |
| XM_036967883.1 | mRNA | downstream | 57901 | 8772336 ~ 8800464 (+) | False | LOC110520836 |
| TU252560 | other | upstream | 214643 | 8399071 ~ 8489067 (+) | False | G221299 |
| TU252562 | other | upstream | 214643 | 8399071 ~ 8489067 (+) | False | G221299 |
| TU252563 | other | upstream | 292180 | 8399071 ~ 8411530 (+) | True | G221299 |
| TU252485 | other | upstream | 531487 | 8170707 ~ 8172223 (+) | False | LOC110520790 |
| TU251574 | other | upstream | 1255833 | 7446369 ~ 7447877 (+) | True | LOC118945274 |
| TU252829 | other | downstream | 14542 | 8728977 ~ 8732478 (+) | False | G221514 |
| TU252831 | other | downstream | 14542 | 8728977 ~ 8731107 (+) | True | G221514 |
| TU252791 | other | downstream | 46899 | 8761334 ~ 8763589 (+) | False | LOC110520796 |
| TU252792 | other | downstream | 59612 | 8774047 ~ 8774950 (+) | True | LOC110520836 |
| TU252852 | other | downstream | 125789 | 8840224 ~ 8908728 (+) | False | G221526 |
