RNA id: XM_021589496.2


Basic Information

Item Value
RNA id XM_021589496.2
length 3924
RNA type mRNA
GC content 0.44
exon number 9
gene id mboat7
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10063117 ~ 10072855 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

atttttttgagcagtgtatttttgttcagtgtatcattgggtatgacagttgaacaaAGCTTATGCGACATTAAGTAATATTtctcaagaatcaatgggttcGCTATATTAATGTAAAATTCCAAACCATTTCAGGCAGAATGATTTATTCTTTTTGAAACGTACTGCCTTTATTTATGGACTGGGCAGTGTCCGTGGGCGGGGTTTTGGTTGTGATTGACACGTTGTTGCGGTAGTAGGAAGTGGGATTTACCAAATCATCACTGTGCTTGAATATTTGTTCCAGGGATTGTTAACTATATTGAATGTTGGCCTGATTTTAAACtGTGCAGAGAGATGTCTCCTGATGAGCTGGTCTACTTGGGAATTCTCGCTGCTTCCATCCCTATCGGGTTCCTATTCCGGTACCCGAGTCCTCCAGTGAAGCAGGGGGCAGCGTTGCTCTTGGGCCTCTCGATCACCATAGCAACCTGTCAGGTCCATGCCCTCCACTCGCTTGTGACAGTGCTTGGAACATGGATCATCATCAAGAGCAGCTGGCGGAGtgccccagctctctctctggcctggaccttcctctacctcctcttcttcAGACTGGTCACATGGTTCGGCCTGCCGCCGCCAACACCCTTTGCCAACGCCATCCAGCTACTCCTCACTCTGAAGATGGTCAGTCTGGCCAATGAGGTGCAGAGTTTTCACCTGGAGAAGAAACAGGAAGTGAGCTCATTTTCTAAGTCTCCTGTGGTTGGTGGACTGTCCCAAGAGCCTTCCCTCTATGATATGATAGCCTATAGCTACTGCTATGTGGGTATAATGACAGGCCCGTTCTTCCGGTTCCAAACCTATGTGGACTGGCTGAGGCAGCCCAGCTCCTTGGACCTTCCTGGCTGGGTACCCTGCATGCTGAGGCTGAGGTTGGTGCCTGTCTACGGAGCTCTGTTCCTGACCGCCAACATGTACTTCCCCCTGGCATACGTCCGCACTGAAGAGTTCCTGGAACATCACTTTTTCTTCAGGTTGTTCTACATGACGGTGGTGTTCTTTGTGTTCCGGATGCGGTTCTACGCTGCATGGTGTGGGGCAGAGGCTGGCTGCATCAGCGCAGGACTGGGCTGTTACCCAGAGGGGGCGCTCTCCAAGCCGGGAGGGGGTCCCACTGTCAACTACAGccctgaccctgaaAGTCCGGTTGTGTACGACTTCAAAACCATCCAGAACATTGACCCATACAACACTGACTTCTGTGTGAAGGTCCGACACGGGATgcgctactggaacatgactgtgcagtggtggctgcatcactaCATCTACCCCAACTCCCCCTTCAAGGCTTACGCACTCAAGGCTGGATGGACCATGTTCATCAGTGCATACTGGCACGGGCTTCACGCTGGCTACTACCTGTCATTcctcaccattcctctgtgtatTGCGGCTGAGTCGGCCATGGAGGCGTCGGTCAGGGCCAAGCTGGGGCCCCGGGGTCAGAGTGCCTTCGACTGGGTCCACTGGTTCCTCAAGATGAGGGCCTATGACTACATGTGTATGGGCTTCGTCCTGCTGAAGGCCAGCGACACCGTCCACTACTGGACCTCCATCTACTTCATCATCCACATCATCGCCCTGGCCTGCATTCTGTTCGGGAGGCTGAtgaagggaggaaagagggagagaaagaagagtgaAAAGGAGGAGAAAATTGAGGGGGAGAAGAAAGAGGTGAAGCAAGAGGAcgtgagagagaagacagagtgaGAATGGATTGATGGATGGGAGGATGTACTGTATGGGGAGGATAGGTTTACTAAAGAACTACTATTCCCACAATGCGCTGTCTGTCACTGATCTGTATGGGTCACTTTTGTCCGTTAGGTCCAGTGATGTCTCCCCTGGTAGAGAAGAGTTATGTTCAATCCCAAACTGGCCCCTAGACCCTACTAGGGTTGGATTTGCAGTTGGTAGGTAGAATAGATGAAGTTGTAGGATTTCCCTAACCAGGAGACATCATTGGACTTCTAGCTGAATACAGTGAATCCTTATGAACATTGTTGTAACCCAGTAACAGTTGCCATGGTGATATTTCATTACAAACCACGTGTACATACAGGTATAATTGGGTGAAAGAATGTTTGCTTAATGAATGTTATTTGATGTGTGAGTGGCAAAAAAGTTCAGGGGGATTGAGATTATTCAGCTACTTCacttgtgcgtatgtgtgtgattATTTCAAATCACAGTCAATTTTCATACAAATATACTTCAATTAGTTTAGAGGACACAAAATTGTATGTTCAAGATGCTGCCTTGAAACAGAGTATAAAGTACTGTATAACCACAGCGGCACATCCCTTGAATCCATTCATAGAGCAAGGACTCAATTTGAACTGGGATGTAAGTATGTTACTCAGTCTGTATTTTTGGCTAAATCTCTAATCCCATTGACATCAAAGCATGATTTACTCAAAGTTAAATACAAGTCACAGGCATTTATCTCAAGCCATAACCAGATCAACAATTTCATTTTCCCGGGGCAACAAGATTTTCTGCTTCTTTATATTTTCGAGTTTTCATTGATCAGACCGTTCCTATGATCAGTTATAGAATAGTGCAGAAAAGTGAACTTTGGATAGCCATGAGTACATACTGAGTTATACTTGGCTAGTTTTAAAACGCATATAGAGGATCCAGTCATAATGAATGTGGCAGTTGTATACGTTCTCTTTCCTCAACATTCTTATTAGGTTTTATATTATGATAAGAAGATGATCATTTATCCCTTATCTCCAAGTTGAAAGAACACAAATTCTGTCATTATTAAGTGGAGCCATCCTCAGTGATTTGTTCTCAGAGTAAAGACCAAGAAACTTGAAATAACTTTCACTGTGTCAAGAGGGGCTACTGGAACCAAAAAGACCCGTGCAAATTTCAGAATGGAATCTGTGGTTTAGAAAAATACATAAATTGCTTAAGGTATTTGCTATGTTGATTTTAATCTGAATTTATTTTACTGCATTATTTAAAACGTAGTTTTGGGTGATCTTTTGATTTGACTTGGCCTGTAAATGAGCATTTTACTCATATCTCTTCTTTACAAAAATGATCTGTCCTGCATTCCGTAGTTATTTGATTAgtaatctcttgtggacagatGCACATAACATAAATAGAGCATCTGCTGCAATTACGCCAGAATGGAGTTCTGGGTGTCAGATTATTTGATTAGAGATGTAATTATATACTGTATGgtgaatatttatttattgttctttgttgttgtttgtgtgtcaCTGGCTACATCTCAAATGACACCCGGCTGTTCCCCAGacaatgcactacttttggtcagacctgggccaaaagtagtgcattcTATTAGGAAATAAGTTGCCTCAGTCAGAACATTTTGGCAGTGACtgaggactgactgactgctacgGTAAGGACCTACCTTACCAGTCAGTCCTCAGCCACTGCCAAAATGTTTGACTGCCATCTTATTACAAATGTAATGgtatttcaaatatatatatattgtgctGACAGTAGAATACAAAAAGTGATTTGGAATTATATTTCTTGTAATTTAATTGACTAGATAGCATGGAAGCATTGTATTATTATTGTTTACCACAATCTGATATAGCCAAACCCTCCCTCCTTTTCCTTGTGCCAAAACCCGAGCCCCGAAGAAACGACTCCCTTGTGTTTTTTTTATCAGCCAACTCATTTCAGTACATGACCAGTATAGAAAACATTCCTTGATGGTTgcttctccatctttctctctgtcacatgTAATATTTCTTgtgtatttttgtttgtttctgaATGGTTTCACCTTGATGATTGTAACTCTCCCTGccttgtaacagttcagtgttacCAACGGAATACATGTCTCAGATATTCAACACG

Function

GO:

id name namespace
GO:0008654 phospholipid biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG:

id description
K13516 MBOAT7; lysophospholipid acyltransferase 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU254795 lncRNA downstream 38261 10024459 ~ 10024856 (-) True LOC110520824
TU254787 lncRNA downstream 60223 10001415 ~ 10002894 (-) True LOC110508696
TU254784 lncRNA downstream 63741 9998968 ~ 9999376 (-) True G223058
TU254776 lncRNA downstream 75995 9980349 ~ 9987122 (-) False G223052
TU254817 lncRNA upstream 13997 10086852 ~ 10089362 (-) True G223081
TU254820 lncRNA upstream 26606 10099461 ~ 10105025 (-) True LOC110520825
TU254852 lncRNA upstream 70454 10143309 ~ 10143823 (-) True G223112
TU254855 lncRNA upstream 80490 10153345 ~ 10153706 (-) True G223115
TU254899 lncRNA upstream 144606 10217461 ~ 10219349 (-) True G223148
XM_021589457.2 mRNA downstream 647 10053535 ~ 10062470 (-) True tmc4
XM_021589511.2 mRNA downstream 9749 10047635 ~ 10053368 (-) False LOC110508742
XM_021589518.2 mRNA downstream 9749 10047635 ~ 10053368 (-) True LOC110508742
XM_036968378.1 mRNA downstream 15633 10024448 ~ 10047484 (-) False LOC110520824
XM_021589539.2 mRNA upstream 1870 10074725 ~ 10077392 (-) True rps9
XM_036968381.1 mRNA upstream 26582 10099437 ~ 10128902 (-) False LOC110520825
XM_036968382.1 mRNA upstream 26582 10099437 ~ 10128902 (-) False LOC110520825
XM_021589618.2 mRNA upstream 71678 10144533 ~ 10151145 (-) True LOC110508790
XM_021589630.2 mRNA upstream 87479 10160334 ~ 10163967 (-) True LOC110508798
TU254793 other downstream 39914 10020648 ~ 10023203 (-) False LOC110508724
TU254794 other downstream 39932 10020648 ~ 10023185 (-) True LOC110508724
TU254805 other downstream 48225 10012961 ~ 10014892 (-) True G223070
TU254786 other downstream 60223 10001415 ~ 10002894 (-) False LOC110508696
TU254343 other downstream 379746 9679908 ~ 9683371 (-) False LOC110534283
TU255954 other upstream 998091 11070946 ~ 11073750 (-) False znf628
TU255996 other upstream 1099265 11172120 ~ 11174367 (-) True G223942
TU256045 other upstream 1203062 11275917 ~ 11278628 (-) False G223969
TU257101 other upstream 1654507 11727362 ~ 11741584 (-) True LOC110509576
TU257113 other upstream 1679996 11752851 ~ 11753680 (-) False G224869

Expression Profile