Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036969635.1 |
| length | 946 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 6 |
| gene id | LOC110503652 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13356612 ~ 13358505 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007586 | digestion | biological_process |
| GO:0006508 | proteolysis | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| K01312 | PRSS1_2_3; trypsin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU258024 | lncRNA | upstream | 40 | 13349597 ~ 13356572 (+) | True | G225583 |
| TU258023 | lncRNA | upstream | 9340 | 13346110 ~ 13347272 (+) | True | G225582 |
| TU258015 | lncRNA | upstream | 12532 | 13343847 ~ 13344080 (+) | True | G225574 |
| TU257956 | lncRNA | upstream | 17387 | 13336491 ~ 13339225 (+) | True | LOC110503641 |
| TU258002 | lncRNA | upstream | 56955 | 13298873 ~ 13299657 (+) | True | G225562 |
| TU258047 | lncRNA | downstream | 33719 | 13392224 ~ 13394669 (+) | True | G225606 |
| TU258074 | lncRNA | downstream | 107708 | 13466213 ~ 13466678 (+) | True | G225631 |
| TU258086 | lncRNA | downstream | 115742 | 13474247 ~ 13474533 (+) | True | G225642 |
| TU258084 | lncRNA | downstream | 121393 | 13479898 ~ 13480109 (+) | True | G225640 |
| TU258089 | lncRNA | downstream | 121616 | 13480121 ~ 13482256 (+) | True | G225645 |
| XM_036969608.1 | mRNA | upstream | 19236 | 13295512 ~ 13337376 (+) | False | LOC110503641 |
| XM_036969525.1 | mRNA | upstream | 66337 | 13246290 ~ 13290275 (+) | False | LOC110510088 |
| XM_036969524.1 | mRNA | upstream | 66337 | 13246314 ~ 13290275 (+) | False | LOC110510088 |
| XM_036969527.1 | mRNA | upstream | 66337 | 13246362 ~ 13290275 (+) | True | LOC110510088 |
| XM_021591406.2 | mRNA | upstream | 110943 | 13241775 ~ 13245669 (+) | True | LOC110510079 |
| XM_021591477.2 | mRNA | downstream | 22626 | 13381131 ~ 13388307 (+) | True | LOC110510128 |
| XM_021591521.2 | mRNA | downstream | 55669 | 13414174 ~ 13435615 (+) | True | LOC110510160 |
| XM_021591577.2 | mRNA | downstream | 125802 | 13484307 ~ 13486285 (+) | True | LOC110510198 |
| NM_001124346.1 | mRNA | downstream | 145582 | 13504087 ~ 13511167 (+) | False | apoe |
| XM_036963055.1 | mRNA | downstream | 145590 | 13504095 ~ 13511896 (+) | True | apoe |
| TU257853 | other | upstream | 305659 | 13047500 ~ 13050953 (+) | True | LOC110510042 |
| TU257841 | other | upstream | 354396 | 13001571 ~ 13002216 (+) | True | LOC110509979 |
| TU257850 | other | upstream | 379833 | 12976173 ~ 12976779 (+) | True | LOC110509972 |
| TU257885 | other | upstream | 390079 | 12966032 ~ 12966533 (+) | True | G225451 |
| TU256720 | other | upstream | 695445 | 12660620 ~ 12661167 (+) | True | grik5 |
| TU258093 | other | downstream | 133066 | 13491571 ~ 13491980 (+) | True | G225649 |
| TU258095 | other | downstream | 135380 | 13493885 ~ 13494435 (+) | True | G225651 |
| TU258078 | other | downstream | 159143 | 13517648 ~ 13520035 (+) | True | LOC110510206 |
| TU258116 | other | downstream | 187368 | 13545873 ~ 13546978 (+) | True | G225671 |
| TU258117 | other | downstream | 191593 | 13550098 ~ 13550582 (+) | True | G225672 |
