Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU260270 |
| length | 391 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 2 |
| gene id | LOC110519916 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 15249894 ~ 15271273 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU260355 | lncRNA | upstream | 8294 | 15250931 ~ 15253979 (+) | True | G227610 |
| TU260354 | lncRNA | upstream | 14271 | 15247776 ~ 15248002 (+) | True | G227609 |
| TU260325 | lncRNA | upstream | 79759 | 15181871 ~ 15182514 (+) | True | G227580 |
| TU260318 | lncRNA | upstream | 110692 | 15151348 ~ 15151581 (+) | True | G227573 |
| TU260315 | lncRNA | upstream | 113987 | 15148081 ~ 15148286 (+) | True | G227570 |
| TU260273 | lncRNA | downstream | 4891 | 15276160 ~ 15277190 (+) | True | G227534 |
| TU260360 | lncRNA | downstream | 6803 | 15278072 ~ 15278362 (+) | True | G227615 |
| TU260364 | lncRNA | downstream | 10404 | 15281673 ~ 15281989 (+) | True | G227619 |
| TU260365 | lncRNA | downstream | 26632 | 15297901 ~ 15298122 (+) | True | LOC110519929 |
| TU260374 | lncRNA | downstream | 37952 | 15309221 ~ 15310171 (+) | True | G227629 |
| XM_021596785.2 | mRNA | upstream | 49574 | 15204527 ~ 15212699 (+) | True | LOC110519918 |
| XM_036964111.1 | mRNA | upstream | 120812 | 15138558 ~ 15141461 (+) | True | LOC118944493 |
| XM_036964096.1 | mRNA | upstream | 123917 | 15136772 ~ 15138356 (+) | True | LOC118944490 |
| XM_036963639.1 | mRNA | upstream | 129993 | 15115872 ~ 15132280 (+) | False | tyrobp |
| XM_036970221.1 | mRNA | downstream | 11636 | 15282905 ~ 15298123 (+) | False | LOC110519929 |
| XM_021596798.2 | mRNA | downstream | 28339 | 15299608 ~ 15319903 (+) | False | gapdhs |
| XM_021596797.2 | mRNA | downstream | 29384 | 15300653 ~ 15319903 (+) | True | gapdhs |
| XM_036970248.1 | mRNA | downstream | 49094 | 15320363 ~ 15324017 (+) | False | LOC110519928 |
| XM_021596799.2 | mRNA | downstream | 49094 | 15320363 ~ 15324018 (+) | True | LOC110519928 |
| TU260351 | other | upstream | 17991 | 15243946 ~ 15244282 (+) | True | G227606 |
| TU260267 | other | upstream | 166360 | 15073144 ~ 15095913 (+) | True | LOC110511049 |
| TU260122 | other | upstream | 264198 | 14997159 ~ 14998075 (+) | False | G227405 |
| TU260123 | other | upstream | 264198 | 14997159 ~ 14998075 (+) | True | G227405 |
| TU260067 | other | upstream | 270979 | 14990520 ~ 14991294 (+) | True | LOC110510950 |
| TU260768 | other | downstream | 417074 | 15688343 ~ 15696644 (+) | True | zgc:162160 |
| TU261485 | other | downstream | 1242234 | 16513503 ~ 16515893 (+) | True | LOC118944532 |
| TU261556 | other | downstream | 1372082 | 16643351 ~ 16647584 (+) | True | LOC110503770 |
| TU261452 | other | downstream | 1523430 | 16794699 ~ 16798932 (+) | True | LOC100653482 |
| TU264064 | other | downstream | 3024085 | 18295354 ~ 18296105 (+) | True | G230916 |
