Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00028757 |
| length | 954 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 6 |
| gene id | XLOC_014527 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 7309050 ~ 7406933 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006979 | response to oxidative stress | biological_process |
| GO:1903204 | negative regulation of oxidative stress-induced neuron death | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005730 | nucleolus | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-030131-2438 | Predicted to be involved in response to oxidative stress. Predicted to be active in nucleus. Is expressed in central nervous system; head; lateral line ganglion; and olfactory pit. Human ortholog(s) of this gene implicated in cerebellar hyplasia/atrophy, epilepsy, and global developmental delay. Orthologous to human OXR1 (oxidation resistance 1). |
| ensembl_id | ENSDART00000092375 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00028754 | lncRNA | downstream | 18434 | 7287530 ~ 7291703 (-) | True | XLOC_014526 |
| TCONS_00028753 | lncRNA | downstream | 26587 | 7276060 ~ 7283550 (-) | False | XLOC_014526 |
| TCONS_00028747 | lncRNA | downstream | 49218 | 7258339 ~ 7260919 (-) | False | XLOC_014525 |
| TCONS_00030150 | lncRNA | downstream | 394564 | 6900956 ~ 6915573 (-) | True | XLOC_014517 |
| TCONS_00030149 | lncRNA | downstream | 408801 | 6892715 ~ 6901336 (-) | True | XLOC_014516 |
| TCONS_00028764 | lncRNA | upstream | 179849 | 7501070 ~ 7501739 (-) | True | XLOC_014533 |
| TCONS_00030151 | lncRNA | upstream | 191897 | 7513118 ~ 7513678 (-) | True | XLOC_014534 |
| TCONS_00028767 | lncRNA | upstream | 238699 | 7559920 ~ 7575188 (-) | False | XLOC_014537 |
| TCONS_00030152 | lncRNA | upstream | 240877 | 7562098 ~ 7576117 (-) | False | XLOC_014537 |
| TCONS_00030153 | lncRNA | upstream | 243752 | 7564973 ~ 7567310 (-) | False | XLOC_014538 |
| TCONS_00028752 | mRNA | downstream | 18404 | 7276060 ~ 7291733 (-) | False | XLOC_014526 |
| TCONS_00028749 | mRNA | downstream | 35293 | 7265376 ~ 7274844 (-) | False | XLOC_014525 |
| TCONS_00028746 | mRNA | downstream | 37216 | 7249110 ~ 7272921 (-) | False | XLOC_014525 |
| TCONS_00028758 | mRNA | upstream | 92721 | 7413942 ~ 7420867 (-) | True | XLOC_014528 |
| TCONS_00028759 | mRNA | upstream | 111489 | 7432710 ~ 7441948 (-) | False | XLOC_014529 |
| TCONS_00028760 | mRNA | upstream | 118574 | 7439795 ~ 7441686 (-) | True | XLOC_014529 |
| TCONS_00028761 | mRNA | upstream | 124423 | 7445644 ~ 7450796 (-) | True | XLOC_014530 |
| TCONS_00028763 | mRNA | upstream | 161563 | 7482784 ~ 7495006 (-) | True | XLOC_014532 |
| TCONS_00028751 | other | downstream | 32544 | 7276060 ~ 7277593 (-) | False | XLOC_014526 |
| TCONS_00028719 | other | downstream | 1071148 | 6232164 ~ 6238989 (-) | True | XLOC_014509 |
| TCONS_00028709 | other | downstream | 1466932 | 5843091 ~ 5843205 (-) | True | XLOC_014503 |
| TCONS_00028706 | other | downstream | 1536102 | 5773921 ~ 5774035 (-) | True | XLOC_014501 |
| TCONS_00028700 | other | downstream | 1894222 | 5415799 ~ 5415915 (-) | True | XLOC_014495 |
| TCONS_00028762 | other | upstream | 146980 | 7468201 ~ 7468316 (-) | True | XLOC_014531 |
| TCONS_00028774 | other | upstream | 504174 | 7825395 ~ 7825533 (-) | True | XLOC_014543 |
| TCONS_00028791 | other | upstream | 1531319 | 8852540 ~ 8852655 (-) | True | XLOC_014556 |
| TCONS_00028818 | other | upstream | 2691277 | 10012498 ~ 10012614 (-) | True | XLOC_014580 |
| TCONS_00028819 | other | upstream | 2802012 | 10123233 ~ 10123347 (-) | True | XLOC_014581 |
