Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU261485 |
| length | 625 |
| RNA type | TUCP |
| GC content | 0.49 |
| exon number | 3 |
| gene id | LOC118944532 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 16477925 ~ 16515897 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0016787 | hydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU261329 | lncRNA | upstream | 284158 | 16226906 ~ 16229345 (+) | True | G228451 |
| TU261287 | lncRNA | upstream | 347138 | 16166023 ~ 16166365 (+) | True | G228414 |
| TU261085 | lncRNA | upstream | 687795 | 15825304 ~ 15825708 (+) | True | G228223 |
| TU260833 | lncRNA | upstream | 696363 | 15815287 ~ 15817140 (+) | True | G228034 |
| TU260831 | lncRNA | upstream | 711648 | 15801361 ~ 15801855 (+) | True | G228032 |
| TU261600 | lncRNA | downstream | 175651 | 16691544 ~ 16693504 (+) | True | G228707 |
| TU261607 | lncRNA | downstream | 186759 | 16702652 ~ 16702864 (+) | True | G228711 |
| TU261611 | lncRNA | downstream | 191266 | 16707159 ~ 16734495 (+) | True | G228715 |
| TU261625 | lncRNA | downstream | 195017 | 16710910 ~ 16711817 (+) | True | G228722 |
| TU261662 | lncRNA | downstream | 246228 | 16762121 ~ 16762351 (+) | True | G228752 |
| XM_036970561.1 | mRNA | upstream | 37134 | 16457719 ~ 16476369 (+) | True | LOC118946091 |
| XM_036970525.1 | mRNA | upstream | 540160 | 15939449 ~ 15973343 (+) | False | hace1 |
| XM_036970531.1 | mRNA | upstream | 540160 | 15939449 ~ 15973343 (+) | False | hace1 |
| XM_036970538.1 | mRNA | upstream | 540160 | 15939449 ~ 15973343 (+) | True | hace1 |
| XM_036970535.1 | mRNA | upstream | 542314 | 15939449 ~ 15971189 (+) | False | hace1 |
| XM_036970562.1 | mRNA | downstream | 35542 | 16551435 ~ 16575223 (+) | True | LOC118946105 |
| XM_036970560.1 | mRNA | downstream | 76261 | 16592154 ~ 16598002 (+) | True | LOC118936471 |
| LOC110503770 | mRNA | downstream | 103299 | 16619192 ~ 16674738 (+) | False | LOC110503770 |
| XM_021592640.2 | mRNA | downstream | 163000 | 16678893 ~ 16700834 (+) | False | sim1a |
| XM_021592643.2 | mRNA | downstream | 163000 | 16678893 ~ 16700834 (+) | True | sim1a |
| TU260768 | other | upstream | 816859 | 15688343 ~ 15696644 (+) | True | zgc:162160 |
| TU260351 | other | upstream | 1269221 | 15243946 ~ 15244282 (+) | True | G227606 |
| TU260267 | other | upstream | 1417590 | 15073144 ~ 15095913 (+) | True | LOC110511049 |
| TU260122 | other | upstream | 1515428 | 14997159 ~ 14998075 (+) | False | G227405 |
| TU260123 | other | upstream | 1515428 | 14997159 ~ 14998075 (+) | True | G227405 |
| TU261556 | other | downstream | 127458 | 16643351 ~ 16647584 (+) | True | LOC110503770 |
| TU261452 | other | downstream | 278806 | 16794699 ~ 16798932 (+) | True | LOC100653482 |
| TU264064 | other | downstream | 1779461 | 18295354 ~ 18296105 (+) | True | G230916 |
| TU264434 | other | downstream | 2054116 | 18570009 ~ 18586841 (+) | True | LOC110511593 |
| TU264626 | other | downstream | 2335356 | 18851249 ~ 18851982 (+) | True | G231438 |
