RNA id: XM_036971924.1


Basic Information

Item Value
RNA id XM_036971924.1
length 6488
RNA type mRNA
GC content 0.48
exon number 22
gene id LOC100136306
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21649441 ~ 21713248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTGGAAACGAAAGCCTACCCCTGTGCATGAATGAGTAAGACGCCGCCacgaggtgaacacacacactttcatacaAGCACATACACACTGTTCCAGCGCCAGGCAGTCAGTCTCTACTCCGACTGGCCAAAGCTGCCTCATATGGAATTTAGCCTCATATGGATAGCCTCAAGCTATCCAGCGTAACACTGAAATATACAGAGTACAAGGGATACTGGCATGAaaccagacatacacacacagacacagggataTGCAGCTGTGTGAGGAGCCGGACACACCCTCAGACCAGACGAAGggaggcagagtgtgtgtgtgcgtgtttctttGACCTGTGGCTGTAGAGGATTTTCTTGGTGTGTGACGGCAGTTGTCATCTCTTGTTCTTTACCTGATGCCGTGGGATTTCCTGACCCTGGAGTTCAACAGCTGACCCATGCAGGCATAGAATCAGCTTCCCTGAGTTGTGGACCTGGAACACAGCTAAAGGTGCTGAGCAGTGCTGGTACTTTGCTAACCTTTCCCTGGAATATTTTCTAATTCAGGCAAAAAGTTATCATGCTACAACTATGAAACAACAGGCACATTTTCTGCAGAGATATGCTACTTTGTCTGACACAGCAAATAATCAAGGACTGTCTTTGCTTAGCCTAAAATAATTGAATCAGGAAAGCCAACGCCAACTTTGTCCAGTCTGTTTTCTTTGGTAATAAGAGGTGGGAGCTAGTACCTCTCAAATTACTGACTGTGGCTGTACATTCATTCTGTTGATTCTCCTATTTATTTTATTCTGTTTTCTTTGTGCGCACTAAAAGGAAAAACTTAATTGATGTTTTTTTTGGCCGATATCCCCTGCTTTCGTGAACCACGCGTTGCCTTTTCGCGGGTTTCGCTTACCCATCAGCTCCTCTGCCCACACACAGCTCGAGCCTCCCAGCTGATATTTCAcctcagtcactgacagtcacagaTGCCAAGACGTCGGCATAAACCGGAGCTTGACATGGAGGGAGTAAACTCAATTTAAGtCTCCCTATGTCTCCCTCTTAAGCTCAACAGGATAAATAATTCACAAGGACATAATTCAACAGCCTAACAGGatgaggaggcagggagagaaacTGTTGCTGGTTTTTCTTCTGCTGCTGGGTGCCTGTCTCCAGTGGGTCCAGTCTGGCAGGTCTTCCCGGCACCGTGATTCACATCGACGCCCCAGAGAGCACCGGGACCATCGGCAGCACCGGAACATCACGCTGGCCATCATCCTACCACAGAGAAACACTGCCTACCCCTGGGCCTGGCCCCGTGTGGGTCCGGCTCTGGAACGAGCCATTGACACCATCAACACTGACCCAGCGCTCCTCCCTGGCCACCACCTGGGTTACGTGTTTGAGAACAGCGAGAACGAGGAGGGCATCTGCTCTGAGTCCATCGCCCCACTCATGGCTGTTGACCTCAAGTTCGCCCACGACCCCTGGGCTTTCATTGGGCCGGGCTGTGACTACACCTCCTCCCCAGTGGGCCTCTTCACCACCCACTGGGACATCCCCATGGTAACGGCGGGCGCCCCAGCCGTGGGCTTCAACGGAATCAACATGTACCCGTCCATCACCAACACGGGCCCCACGCACAAGAAGCTGGGCAAGTTCGGCCTCCATATCTGCAAGCACTTTGAGTGGAAGGAGCAGGTGCTGCTCATGTTCAGTGACAACAAGAAGGACGACCGACCGTGCTACTTCGCTGTGGAGGGCCTCTACACAGAGCTGCACTTGAACAACATCACCTCGGTGGACCTGGTGTTTGAGGAAAACACTGGACCAGTCAACTACTCTGACCTGCTCCACAACATCAAGCAAGATGGCCGAGTGGTGTTTGTGTGTTGCTCTCCGGACACATTCAGGCAGCTGATGGTTCACTTCCGGCGGGCAGGCCTTCCTCAGGAGGAGTTTGTTTTCTTCTACATTGACATGTTTGGACACAGCCTGGACTCCCAGAATGCTCAACCGTGGGCCAGAGGGGACCAAGACGACCTTGTCGCCAAGGAGGCCTTCCAGAGTGTGAAAATCCTGACCTATAGAGAACCACAGAACCCTGAATATAAAGATTTTGTGAGGGATCTGAAGACAGATGCCAAGAGAATGTTCAACTTTACGGTGGAGGACTCACTGATGAACATAATCTCCGGAGGGTTCTACGACGGGTTGATGCTGTACACCCACGCCCTGAACGAGACCATGACCTCACCAGAGGACAGACCTGTGGGGAAAACCGTAACCAGGAGGATGTGGAACCGCACCTACAACGGTGTAACAGGCCTGGTGCAGATAGATGAAaatggggacagagagacagactttgCTTTCTGGGACATGACTGACACCAACACCAGTGTTTTCCAGATTGTGTCCGTGTACAACGGCTCTCAGAAGAAGCTGAGGGCCTTGCCTGGGATGGACATCCAGTGGCCAGGGGGCGCTGCTCCTTTAGATGTGCCCGTCTGTGGCTTTAAGAACGACAACCCAGCCTGCCTCGCACGAACCATCACAATCCACCAGATGGTAACAATTGTGGTGTtcttcatcattatcatcatcctcACAATTACTGTCTTCATATACAGgaagCTTAAGCTTGAAAATGAACTGGTGGCTCAGCTGTGGAGGGTCTCCTGGGAGGATATTCAGATGAGCAACATGGAGAAAGTGCTGCGAAGCGCAGGCAGCAAGCTCACTCTGTCCCTTAGAGGCTCCAACTACGGCTCCCTATTAACAGGAGATGGAAACTTTCAGGTGTTTGCCAAGACAGGCTACTACAAGGCGAACATTGTGGCCATCAAATACATCAACAGAAAACGCATTGAGCTCACCAGAAATGTGCTGTTTGAACTGAAACATATGCGTGATATTCAGAATGAGCACCTGACCCGCTTCATCGGAGCCTGTATCGACCCCCCCAACATCTGCATCATCACAGAGTACTGTCCTCGGGGTAGCTTACAGGACATCATGGAAAATGAGAGCATCACACTGGACTGGATGTTCAGATACTCGTTAATTAATGACATTGTAAAGGGCATGGCTTTCCTCCACAACAGTGTCATCGTCTCCCACGGCAACCTGAAGTCGTCCAACTGCGTGGTGGATAACCGCTTTGTGTTGAAGATCACCGACTACGGCCTGTCCAGCTTCCGCACCGAGAGCAACACAGACGACGCCCATGCTTACTATGCCCGGAAACTGTGGATGGCCCCAGAGCTGCTGAGGTTGGAGAGTGCCCCTCTATGTGGCACCCAGAAGGGGGACGTCTACAGCTTTGGCATCATTCTCCAGGAGGTGGCGCTACGCCACGGAGCCTTCTATCTGGAGGGAGAGCCGCTCAGCCCcaaagAAATCATGGATCGGGTGGCTCTGGGTGAGTGGCCGTGCCTGCGGCCTGCTGTCAACCCTCAGATCCACAGCCAGGAGCTGGGACAACTCATGCAGCGCTGCTGGGCAGAGGAGCCCACCGAGAGGCCAGAGTTCAACCACATCAAACTTCTGCTACGCAAACAGAACAGggagtgCAGCACTAACATCCTGGATAACCTGCTGTCCCGTATGGAGCAGTATGCTAACAACCTGGAGGAGCTGGTGGAGGAGAGAACCCAGGCCTACCACGATGAGAAACGCAAGGCTGAGGCCCTGCTCTACCAGATACTACCACATTCAGTGGCGGAGCAGCTAAAGAGAGGGGAGACGGTGCAGGCCGAGGCCTTTGATTCAGTCACCATCTACTTCAGTGACATTGTGGGCTTCACAGCCATATCAGCTGAGAGCACACCTATGCAGGTTGTGACCCTGCTCAATGACCTCTACACCTGTTTTGATGCCATCATTGACAACTTTGATGTTTACAAGGTGGAGACCATCGGCGATGCCTACATGGTGGTGTCTGGCCTGCCGGTGAGGAACGGGAAGCTACACGGCCGAGAGATCGCCCGCATGGCCCTGGCTCTGCTCAACGCTGTACGCACCTTCAAAATCCGCCACCGGCCTGACCAGCAGCTCAAACTACGCATTGGCATCCACAGCGGCCCTGTGTGTGCAGGAGTGGTGGGGCTGAAGATGCCACGGTACTGTCTGTTTGGAGACACAGTCAACACCTCTTCACGACTGGAGTCCAATGGTGAAGCGCTGAAGATCCATGTGTCTGCGGCCACACGTGACGTCCTGCAGGAGTTCAACTGCTTCCAGCTGGAGCTGAGAGGAGATGTGGCGATGAAGGGGAAAGGGAAAATGACCACCTACTGGCTACTGGGAGAGAGCAAGAGCAATGAGTCAACGAGCTAAGGGGACAAGCCAAGGAGGGAGGAAGGTCATGAAGGAAGAAATGGTGGAGGAAAATGTGAGCAAATAATGGGAACCACTGACTGATGTTCTGGAGCAAGTAAACAAATGAAGAGGCCTGGTGAATGAATGAGGTGGGGATTGGGGAGGTAGATGTGGAAGAAGGAGGATGTAGAGAACTTTCTTCACTTCAGCCCTCCTGCACTTGAACATCTAGATTCTAAGGATATATAGAAAGCTACATgctctgagagtgtgtgtgtgatgttctgTGTATATGTTTTTCCAGTTATATTTCGATGTTGAAGGTTTTGGATGCAACACTGATGGTATTTAGatcggtaaaaaaaaaaaagattcacaAACAGACCTTTACAGGAAGTTGTGGATATTGCTACCTGGTGGTCACATTATGTAACTGTTTTTTGAATTAATGTATTTTATGAGTACATagtatcccactgggcacagaagtcagttcaacgtctagttttgatttaaatttggttgagttgtcaactaattcAACGTGAAATTAACATTGGATTCAGAAAAAAAGACTAAATGCCtgtacgttgatgacttttttgcaaatccaatcagattcccacgttgattcaacatcatcacatacattttgggggttgaaatgacatggaaatgaCGTTCAAACTTTGGGTCTGGGATTTATCATTTGATTCATTTCCACATTAGTGTTTGTGACATGTATCCTCAGACCCCAACCACAATCACTGAGCCTACTCTGGAGTTAAAATGACTTGCTTTATatatgtgggtgggtgggtgtgtctaATGTCTCATCACTGTATATGATTTGTCTATTTACAGTCATATCAGTCTTATTATTTTGTACAATACAGATGTTGTTTATTTCTCAATAGATTATTTTTCTATTGCCTAAAGGGCAATTCACAGAAATGCACTTAAGATAGATACATCCTCTTACTCTGGTGAAATAAAGTCAAGCGTCCCACTTCTTCGGCACCGTATACAGTTTCATTATTCTCACTGAAGTGTACAATTGCCTCTCAATCTGTCTAATCAGATTCAGTGTAATGCATTATTGTTGTTAGTAAAAATATGCAGCTGAGCTTACATCATACCCATTGAAAGTGGCATGATTTTGAACATTACATGTAACagacaaaataatggaaacacttgagtaaatgggggatacaaagtatattgaaagcacaGGTGTGGTTcgtgagttaattaagcaattaacatcccttcatgcttagggtcatataCAAAATGCTGGGCAGACTATTATTTTGGCTACGctcccccataggatgacaatgcccccatccacagggcacgagtggtcactgaatggtttgataagAATGAAAACGGTGTAAACCATATGTCATGGCTGTCTGTCACCAGATCTTGATCCAATTGAATACTTAGGGGATATTCTGGTGCGTTTTCCACCCCAAAAcatcaaattatggaatttctcatggaagaatgtaGCATCCCTACaaaagagttccagacacttgtagaatttaTGCCAAGGTAacttgaagctgttctggctctaCAAGTCTTTAAGCCACCTTTACAAGTCTTTAAGagactttatgttggtgtttctttTATTTTACCTGTATTCAACAGTAATTGAAGAAAGGTAACCATTTCTGCTGGAAAGACAGGCTCTTGACAGAGGATAGCTTTATGAAAATTGTGGATTGACCGCTGGACACACACTGGCTCCTGATTTCCTGAATGGATTTGTCTGAACTGTTACTCTGAAAACACCCCTGGAATAAAATGAAGAGGTCACCAGGGAACTCTTAAAAAGGGTTCACACTGAGAACCTCTATAACTTTGCAATAACAAACCATGTCGAAAGGACAAAATGAATTCTGGGGTAGATGAGTTTAAAGGAATTCTGGGTTAGATGTGTATAAAGTTCCATATTTTGGTTTGGTGTTCACAGTAACCTTTGAGTTTGAGAGTCATGGAGAATGGTATTGTTTTTTGCGTCTCAAGCCAACAGTGTTCATCTGTTGAGAAGTGTTGAACAGATCAATACTGTCTGTAAGACCTCATATATCAGCCTGTTGACATATATTTTCACCTTGTGTTTTTCGGTTTGAATCAGTAAATATGGTATGTGTA

Function

GO: NA

KEGG:

id description
K12323 ANPRA, NPR1; atrial natriuretic peptide receptor A

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU268254 lncRNA upstream 61639 21587443 ~ 21587802 (+) True G234677
TU268229 lncRNA upstream 94900 21551421 ~ 21554541 (+) True G234654
TU268038 lncRNA upstream 147528 21501342 ~ 21501913 (+) True G234500
TU268042 lncRNA upstream 151539 21497532 ~ 21497902 (+) True G234504
TU268035 lncRNA upstream 163251 21485989 ~ 21486190 (+) True G234497
TU268365 lncRNA downstream 47889 21761137 ~ 21761338 (+) True G234775
TU268390 lncRNA downstream 90635 21803883 ~ 21804116 (+) True G234799
TU268403 lncRNA downstream 152545 21865793 ~ 21867110 (+) True G234812
TU268404 lncRNA downstream 154536 21867784 ~ 21868301 (+) True G234813
TU268408 lncRNA downstream 167803 21881051 ~ 21882985 (+) True G234817
XM_036971923.1 mRNA upstream 6183 21632340 ~ 21643258 (+) True LOC110513504
XM_021593290.2 mRNA upstream 24967 21619725 ~ 21624474 (+) False LOC110513472
XM_021593293.2 mRNA upstream 24967 21619725 ~ 21624474 (+) False LOC110513472
XM_021593298.2 mRNA upstream 24967 21619725 ~ 21624474 (+) True LOC110513472
XM_036964154.1 mRNA upstream 152167 21493159 ~ 21497274 (+) True LOC110513414
LOC110503897 mRNA downstream 6997 21720245 ~ 21733022 (+) True LOC110503897
XM_021593324.2 mRNA downstream 19859 21733107 ~ 21737376 (+) True pdia7
XM_021593310.2 mRNA downstream 25262 21738510 ~ 21744261 (+) True LOC110513517
XR_005051423.1 mRNA downstream 30473 21743721 ~ 21743856 (+) True LOC118964374
XM_036971929.1 mRNA downstream 60420 21773668 ~ 21789374 (+) True LOC110513574
TU267870 other upstream 362439 21286726 ~ 21287002 (+) True G234340
TU267841 other upstream 384935 21264075 ~ 21264506 (+) True G234322
TU266973 other upstream 1040716 20608293 ~ 20608725 (+) True G233545
TU266948 other upstream 1083729 20558776 ~ 20565712 (+) True G233521
TU265650 other upstream 1804789 19827130 ~ 19844652 (+) True LOC110512505
TU268500 other downstream 304346 22017594 ~ 22019984 (+) True kiaa0319
TU268551 other downstream 345294 22058542 ~ 22068080 (+) False LOC110503910
TU268548 other downstream 345431 22058679 ~ 22068080 (+) False LOC110503910
TU269077 other downstream 591245 22304493 ~ 22304906 (+) True G235426
TU269168 other downstream 747292 22460540 ~ 22472917 (+) False LOC110514034

Expression Profile