Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU269492 |
| length | 639 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 2 |
| gene id | snrnp48 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 22488821 ~ 22495924 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU269576 | lncRNA | downstream | 46825 | 22447092 ~ 22448225 (-) | True | LOC110503922 |
| TU269572 | lncRNA | downstream | 66526 | 22428231 ~ 22428524 (-) | True | G235846 |
| TU269569 | lncRNA | downstream | 70521 | 22424213 ~ 22424529 (-) | True | G235843 |
| TU269532 | lncRNA | downstream | 129041 | 22365111 ~ 22366009 (-) | True | G235809 |
| TU269533 | lncRNA | downstream | 130288 | 22364549 ~ 22364762 (-) | True | G235810 |
| TU269586 | lncRNA | upstream | 29479 | 22525403 ~ 22526021 (-) | True | G235860 |
| TU269633 | lncRNA | upstream | 86901 | 22582825 ~ 22584854 (-) | True | G235900 |
| TU269650 | lncRNA | upstream | 103906 | 22599830 ~ 22600792 (-) | True | G235916 |
| TU269655 | lncRNA | upstream | 111953 | 22607877 ~ 22608110 (-) | True | G235921 |
| TU269699 | lncRNA | upstream | 176351 | 22672275 ~ 22698611 (-) | True | G235959 |
| XM_021593613.2 | mRNA | downstream | 1034 | 22488821 ~ 22494016 (-) | False | snrnp48 |
| XM_021593599.2 | mRNA | downstream | 7028 | 22462380 ~ 22488022 (-) | False | LOC110513982 |
| XM_036972237.1 | mRNA | downstream | 7028 | 22471363 ~ 22488022 (-) | False | LOC110513982 |
| XM_021593592.2 | mRNA | downstream | 7029 | 22473087 ~ 22488021 (-) | True | LOC110513982 |
| XM_021593617.2 | mRNA | downstream | 34561 | 22457412 ~ 22460489 (-) | True | LOC110514021 |
| XM_021593645.2 | mRNA | upstream | 3521 | 22499445 ~ 22506678 (-) | True | LOC110514079 |
| XR_002470693.2 | mRNA | upstream | 51876 | 22547800 ~ 22548892 (-) | True | LOC110505130 |
| XM_021593671.2 | mRNA | upstream | 80023 | 22575947 ~ 22603330 (-) | True | LOC110514133 |
| XM_021593683.2 | mRNA | upstream | 112680 | 22608604 ~ 22611971 (-) | True | LOC110514157 |
| XM_021593677.2 | mRNA | upstream | 122170 | 22618094 ~ 22641761 (-) | False | bmper |
| TU268720 | other | downstream | 739549 | 21744451 ~ 21755501 (-) | True | LOC118946878 |
| TU268723 | other | downstream | 751639 | 21738845 ~ 21743411 (-) | True | G235092 |
| TU268194 | other | downstream | 996218 | 21498408 ~ 21498832 (-) | True | G234621 |
| TU268159 | other | downstream | 1025105 | 21469661 ~ 21469945 (-) | True | G234600 |
| TU268086 | other | downstream | 1039334 | 21445488 ~ 21455716 (-) | True | LOC110513321 |
| TU269608 | other | upstream | 77909 | 22573833 ~ 22574989 (-) | True | G235881 |
| TU270901 | other | upstream | 661185 | 23157109 ~ 23189031 (-) | True | G237047 |
| TU271267 | other | upstream | 1275600 | 23771524 ~ 23780135 (-) | True | LOC110514600 |
| TU271572 | other | upstream | 1684632 | 24180556 ~ 24183554 (-) | False | G237657 |
| TU271573 | other | upstream | 1684632 | 24180556 ~ 24183964 (-) | True | G237657 |
