Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU273356 |
| length | 572 |
| lncRNA type | sense_over |
| GC content | 0.34 |
| exon number | 1 |
| gene id | LOC110515597 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 25717287 ~ 25747404 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016881 | acid-amino acid ligase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU273360 | lncRNA | upstream | 37123 | 25709421 ~ 25709704 (+) | True | G239217 |
| TU273336 | lncRNA | upstream | 62200 | 25684411 ~ 25684627 (+) | True | G239196 |
| TU273211 | lncRNA | upstream | 154943 | 25591619 ~ 25591884 (+) | True | G239073 |
| TU273180 | lncRNA | upstream | 185022 | 25561588 ~ 25561805 (+) | True | G239043 |
| TU273177 | lncRNA | upstream | 188650 | 25557940 ~ 25558177 (+) | True | G239040 |
| TU273432 | lncRNA | downstream | 92204 | 25839602 ~ 25840173 (+) | True | G239280 |
| TU273452 | lncRNA | downstream | 140092 | 25887490 ~ 25887835 (+) | True | G239295 |
| TU273453 | lncRNA | downstream | 144886 | 25892284 ~ 25894425 (+) | True | G239296 |
| TU273493 | lncRNA | downstream | 199397 | 25946795 ~ 25947982 (+) | True | G239321 |
| TU273807 | lncRNA | downstream | 327050 | 26074448 ~ 26075042 (+) | True | G239604 |
| XM_021594422.2 | mRNA | upstream | 161891 | 25577166 ~ 25584936 (+) | False | LOC110515550 |
| XM_021594428.2 | mRNA | upstream | 161891 | 25577358 ~ 25584936 (+) | False | LOC110515550 |
| XM_036973287.1 | mRNA | upstream | 161891 | 25577826 ~ 25584936 (+) | True | LOC110515550 |
| XM_021594415.2 | mRNA | upstream | 180420 | 25563330 ~ 25566407 (+) | True | si:dkey-82o10.4 |
| XM_036973177.1 | mRNA | upstream | 411004 | 25275792 ~ 25335823 (+) | True | LOC110515430 |
| XM_021594448.2 | mRNA | downstream | 388 | 25747786 ~ 25757241 (+) | False | LOC110515611 |
| XM_021594453.2 | mRNA | downstream | 389 | 25747787 ~ 25757241 (+) | True | LOC110515611 |
| XM_021594460.2 | mRNA | downstream | 12816 | 25760214 ~ 25771793 (+) | False | LOC110515629 |
| XM_021594465.2 | mRNA | downstream | 17997 | 25765395 ~ 25771793 (+) | False | LOC110515629 |
| XM_021594470.2 | mRNA | downstream | 18584 | 25765982 ~ 25771793 (+) | True | LOC110515629 |
| TU273162 | other | upstream | 205214 | 25540769 ~ 25541613 (+) | True | G239026 |
| TU272577 | other | upstream | 547593 | 25195287 ~ 25199234 (+) | True | G238540 |
| TU272008 | other | upstream | 970882 | 24775279 ~ 24775945 (+) | True | G238050 |
| TU272005 | other | upstream | 980464 | 24765666 ~ 24766363 (+) | True | G238047 |
| TU271992 | other | upstream | 996444 | 24749405 ~ 24750383 (+) | True | G238034 |
| TU273930 | other | downstream | 466244 | 26213642 ~ 26220183 (+) | True | G239697 |
| TU273986 | other | downstream | 580010 | 26327408 ~ 26328331 (+) | False | G239752 |
| TU273987 | other | downstream | 580010 | 26327408 ~ 26328025 (+) | True | G239752 |
| TU274539 | other | downstream | 1303788 | 27051186 ~ 27051954 (+) | True | G240244 |
| TU275097 | other | downstream | 1509190 | 27256588 ~ 27264393 (+) | True | LOC110516767 |
