RNA id: XM_036973916.1


Basic Information

Item Value
RNA id XM_036973916.1
length 3154
RNA type mRNA
GC content 0.52
exon number 10
gene id klhl32
representative False

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 34291510 ~ 34328823 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTGACCACATCAAGAGGAGGGGTTTGAATGTGACAATTTAGCTAATACAATGTAACCATCTCAAGTGTCCAAGACAACTGACTGTAAAACCGCAGACCAACTTGTTTACCAGCACTCGTTTCAACTGCTCACCACAAATGCAACACGAACGGATATCAAATGGGAGAAAACAGATTGTCAACAAAACGGAACCGCTGAGGGGACAGGGCCAGAGAACAGTCGTATGAGGCTAATGCAGGAAGTAACTGCAGCCCTCAGGAATCACAGAATACTgttccacctcttctctccttttccgGGAGCATGCCATCTGAACCTTGTGTCAGtgGGCAGGAGCTGGTAACAGACCAGAGGCTATGCCAGTCCAAGTCTCACCAGGACTCCGTCCTCTCCGCCCTCAACCAGCAGAGGAAGGATGGCCTACTCTGTGATGTCACCCTGGTCGCCGGCGACCAGAAGTTCCACGCCCATAAAGCAGTGCTGGCGGCGTGCAGCGATTACTTCCGGgcCATGTTCAGTCTGTGCATGGTGGAGAGTGAGGCAGATGAGGTGACTCTTCAGGGAGTGACCAGTGTGGGACTGAAACATGCACTAGACTTCGCCTACACAGGACAGGAGCTGAACAGTGTTAACTACCTGGACCTGTACCGTGTGGCCGATCTGTTCCACCTCCCTGCTCTGGAGGAGGCTGTGGTCAGCTTCCTGGTAGAACACCTGTGTGAGCTGCAGCAGAGCCGCCAGGAGGAGGTGCTGCTGCTCCCCTACCGCCTCCTCAGGGAGGTGCTGAAGAGCGACCGCCTCACCTCCCTCAACGAGGAGGAGATCTGGCAGCTGGTGGTGTGCTGGTTAGAGCATGACTGTCGGTACCAGTACACCGAGGACCTGATACAGCACGTTCGTTACGGCCTTATGGATGTGGCCGCCCTGCACCACGTGGCACAGTGCCACCCGCTGGTCCAGTCCAGTGCCACCGCCGCCGCCCTAGTGGACGAGGCTCTAGAGTACCACCGTGCCACCTACGCCCAACCCCTCCGCCAGACCGCCCACACCAAGCCCCGCTTCCAGTCTCTCACCCTCTACATCGCCGGCGGGCGCAAGCGCGAGGTGAGCCGCGTGCGGGAGCTGCGCTACTTCAACCCGGCCGCCCAGGAGACCGTGCGCGTGGCCGGGTGCTCCAACTGGAGCGAGCTGGCGCCCATGCCCGCCGGGCGCAGCCACCACTGCGTGGCCGTCATGGGTCACTTCCTGTTTGTGGCAGGCGGCGAGGTGGAGCATTCCACGGGGAGAACGTGTGCGGTGAGGACCGCTTGTCGGTATGACCCCCGGGGGAACCGCTGGACGGAGATAGCCTCCATGAAGGCTTGCAGGGAACACTTTGTCCTGGGGGCTCTGGGCCAGTACCTGTACGCGGTGGGGGGGAGGAACGAGCTGAGACAGGTGCTGCCCACCGTGGAACGCTACTGTCCGAAGAGGAACAAGTGGACCTTCGTCCAGTCCTTTGACCGCTCGCTGTCCTGCCACGCCGGCTGTGTGGCTGACGACCTGCTCTGGgtctcagGTGGAGTCACAAACACAGCTCAGTACCAGAATAGACTGATGGTGTACGACCCAGAACAGaaccAGTGGCTGGCCCGCAGTCCCATGCTACAGAGGCGAGTGTACCATGTCATGGCCGTGGCGAGAAGGCAGCTGTATGTGCTGGGAGGAAATGACCTGGACTACAACAACGACCGCATTCTGGTCCGCCACATCGACTCCTACGACATAGACATGGACCAGTGGACCCGCTGCACCTTCAGCCTACTCACGGGTCAGAATGAATCTGGAGTGGCAGTCCATGATGACCGAATCTATGTTGTCGGTGGATATTCTATCTGGACCAATGAGCCCCTAGCGTGTATTCAGGTGTTGGATGTGAGCACggaggggaaggaggaagtgTTCTATGGACCAACTCTACCGTTCGCCTCCAATGGAATAGCAACGTGTTTCCTCCCTGCCCCATACTTCACCTGCCCCAACCTCCAGACTCTACAAGTGCCCCATCACAGGATAGGGCCTGTCTAACACACTAATATAGACTACAGTAAATGTCTACATAGATATATCATGCAGCTCTTATGGACATACAACTATGTAACACAAAATAACTAATTTACAACACCCCCCTCTTCCTCTAAATGCATTCACACACTATTGCCACCCAGATAAGATTACCCACGTCTTCCCCAGTTTCAGGATCCCAACCTAACCACTCCCAAGTGCAGGTGTCACTGCCCATCCTTGACATTACccataaactgaacaaaaacGTGGCCCTGTATGAAAGGAGGATCCTCGAGGACATTGAGGAGGTTCCCTATTCAGCTCCCCTGTGATGATGGACTGATCTTTCATCAGCTGCAGGGtttgggtcaattccatttcaattcagtcaattcaggaagtaaaacAGAAATTCTGACGACAATTTTGCTCCTTGAAAAGCATTGAGAATAATAGATATTCGATTGGAATAATATATCCCGAACTGCCATAGAATTGACCCCAAACCCTGCTCAGATGACTGGTTGAAATAAAGGGGCTGCACTAGTCAATGGTGCAGAACAGGAGATCGCAATGCTGGAGCACTCAAGGGGAGCAGAGCTCTCTACGGAGTGAAATGGCTCCCTCTTTTACTAATGCACTCTAGGGCTATTGGCACTCTAACTAGCTGTACTTACTTACTACTTACCATAACCCATCTACTCCATACAAAGCCAATGGACCCATCCAAGGTCATTTCAACTGAAACCGGTTATGTGTGAACGAACTGTGGACCCAATCTTACTCTTTCTTGAGCGTGTGTTTTCTATTCAAGCTCAGGATTTAAGACTGTTTAACAGTTCAATGAATGTCTGACCACTGTTATCATACAGTGCATATACTCAACATACTGTGTGTAGGAGAACCTAAGCTATGTGTTGCCACTGTCTTATGCCATTTTCAAAACGTCTTGTTTTACTTTGAGCAAAAAAAATAAGACAAAAGTAAATCTGTAACTCCACCAGCCTCCAGCAGTGAGAGGAagtgtgagaaaaaaaaaacatgtcttgTTTTCAGAATAAAGAGGTACAGTACTGTATCAATAAAGCCCATAAATTGAATTGAGCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU284342 lncRNA downstream 2280 34289006 ~ 34289230 (-) True G249236
TU284282 lncRNA downstream 37616 34253671 ~ 34253894 (-) True G249188
TU284148 lncRNA downstream 250363 34039205 ~ 34041147 (-) True G249067
TU284105 lncRNA downstream 336430 33950569 ~ 33955080 (-) False G249026
TU284646 lncRNA upstream 59693 34388516 ~ 34388730 (-) True G249513
TU284647 lncRNA upstream 60043 34388866 ~ 34389082 (-) True G249514
TU284655 lncRNA upstream 71966 34400789 ~ 34401072 (-) True G249522
TU284634 lncRNA upstream 83151 34411974 ~ 34413480 (-) True G249501
TU284629 lncRNA upstream 84833 34413656 ~ 34415539 (-) True LOC110519296
XM_036964818.1 mRNA downstream 42906 34088843 ~ 34248604 (-) True LOC110504035
XM_021596405.2 mRNA downstream 209815 34078198 ~ 34081695 (-) True pou3f2b
LOC110519190 mRNA downstream 245142 34045603 ~ 34046368 (-) True LOC110519190
XM_021596363.2 mRNA downstream 446700 33838962 ~ 33844810 (-) True tstd3
XM_021596357.2 mRNA downstream 456476 33828223 ~ 33835034 (-) True zgc:172323
XM_036973924.1 mRNA upstream 34180 34363003 ~ 34384107 (-) False LOC110519284
XM_036973922.1 mRNA upstream 35424 34364247 ~ 34384107 (-) True LOC110519284
XM_021596450.2 mRNA upstream 84826 34413649 ~ 34426169 (-) False LOC110519296
XM_036973925.1 mRNA upstream 84826 34413649 ~ 34426171 (-) False LOC110519296
XM_036973926.1 mRNA upstream 99760 34428583 ~ 34454290 (-) False adcy3a
TU283202 other downstream 871803 33419429 ~ 33419707 (-) True G248239
TU280776 other downstream 2710308 31562545 ~ 31581202 (-) False LOC110518371
TU280109 other downstream 3345667 30944953 ~ 30945843 (-) True G245366
TU279011 other downstream 4073921 30211570 ~ 30217589 (-) False G244393
TU284611 other upstream 28452 34357275 ~ 34359451 (-) True G249485
TU285130 other upstream 560683 34889506 ~ 34889954 (-) True G249978
TU285142 other upstream 567135 34895958 ~ 34896296 (-) True G249990
TU286719 other upstream 1811289 36140112 ~ 36144572 (-) True G251462
TU286962 other upstream 2028660 36357483 ~ 36357971 (-) True G251681

Expression Profile