Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC110504133 |
| length | 1364 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 8 |
| gene id | LOC110504133 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 45179364 ~ 45190120 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006298 | mismatch repair | biological_process |
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0007131 | reciprocal meiotic recombination | biological_process |
| GO:0032389 | MutLalpha complex | cellular_component |
| GO:0032407 | MutSalpha complex binding | molecular_function |
| GO:0003697 | single-stranded DNA binding | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU299126 | lncRNA | downstream | 100527 | 45078521 ~ 45078837 (-) | True | G263039 |
| TU299099 | lncRNA | downstream | 138825 | 45040218 ~ 45040539 (-) | True | G263012 |
| TU299098 | lncRNA | downstream | 139836 | 45039251 ~ 45039528 (-) | True | G263011 |
| TU299093 | lncRNA | downstream | 144329 | 45034799 ~ 45035035 (-) | True | G263006 |
| TU299076 | lncRNA | downstream | 177820 | 45000542 ~ 45001544 (-) | True | G262989 |
| TU299206 | lncRNA | upstream | 6883 | 45197003 ~ 45197346 (-) | False | LOC118956634 |
| TU299210 | lncRNA | upstream | 9099 | 45199219 ~ 45199584 (-) | True | G263110 |
| TU299211 | lncRNA | upstream | 9610 | 45199730 ~ 45199996 (-) | False | LOC118956634 |
| TU299212 | lncRNA | upstream | 9970 | 45200090 ~ 45200378 (-) | True | LOC118956634 |
| TU299209 | lncRNA | upstream | 23625 | 45213745 ~ 45214224 (-) | True | G263109 |
| XR_002472923.2 | mRNA | downstream | 75078 | 45099333 ~ 45104286 (-) | False | LOC110520012 |
| XM_021596962.2 | mRNA | downstream | 193110 | 44964412 ~ 44986254 (-) | True | LOC110520009 |
| XM_021596963.2 | mRNA | downstream | 193111 | 44964412 ~ 44986253 (-) | False | LOC110520009 |
| XM_021596961.2 | mRNA | downstream | 222021 | 44941359 ~ 44957343 (-) | True | LOC110520006 |
| XM_021596960.2 | mRNA | downstream | 222032 | 44941359 ~ 44957332 (-) | False | LOC110520006 |
| XR_005046065.1 | mRNA | upstream | 6957 | 45197077 ~ 45200662 (-) | False | LOC118956634 |
| XM_036974223.1 | mRNA | upstream | 20825 | 45210945 ~ 45212683 (-) | True | LOC110520013 |
| LOC110520016 | mRNA | upstream | 38130 | 45228250 ~ 45235027 (-) | True | LOC110520016 |
| XM_021596974.2 | mRNA | upstream | 46380 | 45236500 ~ 45243387 (-) | False | si:ch211-136m16.8 |
| XM_021596977.2 | mRNA | upstream | 112285 | 45302405 ~ 45327280 (-) | False | LOC110520019 |
| TU299078 | other | downstream | 75101 | 45099340 ~ 45104263 (-) | True | LOC110520012 |
| TU299080 | other | downstream | 167115 | 45010172 ~ 45012249 (-) | True | G262993 |
| TU297567 | other | downstream | 1147859 | 43989524 ~ 44031505 (-) | True | G261580 |
| TU295461 | other | downstream | 2852184 | 42305328 ~ 42327180 (-) | False | G259576 |
| TU295450 | other | downstream | 2853586 | 42322739 ~ 42325778 (-) | True | G259576 |
| TU299385 | other | upstream | 346212 | 45536332 ~ 45537542 (-) | True | G263274 |
| TU302286 | other | upstream | 2409098 | 47599218 ~ 47599815 (-) | True | G265988 |
| TU302595 | other | upstream | 2841927 | 48032047 ~ 48033302 (-) | True | LOC110505248 |
| TU304852 | other | upstream | 4305357 | 49495477 ~ 49495803 (-) | True | G268310 |
| TU304858 | other | upstream | 4312296 | 49502416 ~ 49502971 (-) | True | LOC118944672 |
