Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC110504188 |
| length | 861 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 6 |
| gene id | LOC110504188 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 49871807 ~ 49874217 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0016805 | dipeptidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU303990 | lncRNA | upstream | 4015 | 49867215 ~ 49867792 (+) | True | G267547 |
| TU303989 | lncRNA | upstream | 10153 | 49861376 ~ 49861654 (+) | True | G267546 |
| TU303932 | lncRNA | upstream | 77176 | 49791755 ~ 49794631 (+) | True | G267503 |
| TU303899 | lncRNA | upstream | 124105 | 49744473 ~ 49747702 (+) | True | G267471 |
| TU303852 | lncRNA | upstream | 256962 | 49614584 ~ 49614845 (+) | True | G267427 |
| TU304034 | lncRNA | downstream | 32245 | 49906462 ~ 49951847 (+) | True | G267579 |
| TU304035 | lncRNA | downstream | 34677 | 49908894 ~ 49909998 (+) | True | G267580 |
| TU304001 | lncRNA | downstream | 66567 | 49940784 ~ 49946014 (+) | True | G267555 |
| TU304049 | lncRNA | downstream | 81299 | 49955516 ~ 49955866 (+) | True | G267594 |
| TU304051 | lncRNA | downstream | 82856 | 49957073 ~ 49957381 (+) | True | G267596 |
| XM_021597189.2 | mRNA | upstream | 5809 | 49862239 ~ 49865998 (+) | True | LOC110520117 |
| XR_005048018.1 | mRNA | upstream | 104451 | 49757817 ~ 49767356 (+) | True | LOC118959582 |
| XM_021597179.2 | mRNA | upstream | 136345 | 49731876 ~ 49735462 (+) | False | cdca7a |
| XM_021597181.2 | mRNA | upstream | 136345 | 49731876 ~ 49735462 (+) | True | cdca7a |
| XM_036974436.1 | mRNA | upstream | 140704 | 49679142 ~ 49731103 (+) | True | zak |
| XM_036964928.1 | mRNA | downstream | 170501 | 50044718 ~ 50063834 (+) | True | LOC118944674 |
| XM_021584389.2 | mRNA | downstream | 260478 | 50134695 ~ 50136597 (+) | True | hoxd13a |
| XM_021597211.2 | mRNA | downstream | 264996 | 50139213 ~ 50141004 (+) | False | hoxd12a |
| XM_021597212.2 | mRNA | downstream | 270438 | 50144655 ~ 50146492 (+) | True | hoxd11a |
| XM_021597213.2 | mRNA | downstream | 272594 | 50146811 ~ 50153227 (+) | True | hoxd10a |
| TU303972 | other | upstream | 16305 | 49836617 ~ 49855502 (+) | True | G267529 |
| TU303803 | other | upstream | 315969 | 49554498 ~ 49555838 (+) | True | G267381 |
| TU303780 | other | upstream | 359332 | 49510803 ~ 49512475 (+) | True | G267358 |
| TU300304 | other | upstream | 3039563 | 46831008 ~ 46832244 (+) | False | LOC110520046 |
| TU305367 | other | downstream | 288084 | 50162301 ~ 50183026 (+) | True | hoxd3a |
| TU305730 | other | downstream | 728085 | 50602302 ~ 50604816 (+) | True | LOC110520146 |
| TU305958 | other | downstream | 1024372 | 50898589 ~ 50900277 (+) | True | G269291 |
| TU307177 | other | downstream | 1699763 | 51573980 ~ 51578683 (+) | False | LOC110520169 |
| TU308945 | other | downstream | 3292735 | 53166952 ~ 53172428 (+) | True | acvr2aa |
