Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU307464 |
| length | 540 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 4 |
| gene id | LOC110520170 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 51550697 ~ 51559339 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU307453 | lncRNA | downstream | 5951 | 51546561 ~ 51546836 (-) | True | G270627 |
| TU307452 | lncRNA | downstream | 6367 | 51545686 ~ 51546420 (-) | True | G270626 |
| TU307451 | lncRNA | downstream | 9474 | 51542803 ~ 51543313 (-) | True | G270625 |
| TU307448 | lncRNA | downstream | 14148 | 51538336 ~ 51538639 (-) | True | G270622 |
| TU307447 | lncRNA | downstream | 14659 | 51537647 ~ 51538128 (-) | True | G270621 |
| TU307525 | lncRNA | upstream | 111590 | 51665525 ~ 51668106 (-) | True | G270682 |
| TU307574 | lncRNA | upstream | 205209 | 51759144 ~ 51760413 (-) | True | G270730 |
| TU307576 | lncRNA | upstream | 216687 | 51770622 ~ 51771489 (-) | True | G270732 |
| TU307617 | lncRNA | upstream | 276936 | 51830871 ~ 51844042 (-) | True | LOC110520176 |
| TU307650 | lncRNA | upstream | 305119 | 51859054 ~ 51859385 (-) | True | G270806 |
| XM_036974557.1 | mRNA | downstream | 74277 | 51472148 ~ 51478510 (-) | False | fgf9 |
| XM_021583046.2 | mRNA | downstream | 82111 | 51464211 ~ 51470676 (-) | True | LOC110504232 |
| XM_021597292.2 | mRNA | downstream | 163205 | 51276921 ~ 51389582 (-) | True | LOC110520166 |
| XM_021597293.2 | mRNA | downstream | 163206 | 51276921 ~ 51389581 (-) | False | LOC110520166 |
| XM_021597286.2 | mRNA | downstream | 417326 | 51130633 ~ 51135461 (-) | True | cldn10b |
| XM_036963750.1 | mRNA | upstream | 42998 | 51596933 ~ 51619474 (-) | False | il1rl1 |
| XM_036963761.1 | mRNA | upstream | 42998 | 51596933 ~ 51619476 (-) | False | il1rl1 |
| NM_001281424.1 | mRNA | upstream | 51781 | 51605716 ~ 51619142 (-) | False | il1rl1 |
| XM_036974559.1 | mRNA | upstream | 76854 | 51630789 ~ 51680912 (-) | False | LOC110520172 |
| XR_005048987.1 | mRNA | upstream | 76854 | 51630789 ~ 51680912 (-) | True | LOC110520172 |
| TU307414 | other | downstream | 78648 | 51473324 ~ 51474139 (-) | True | fgf9 |
| TU306786 | other | downstream | 423477 | 51128440 ~ 51129310 (-) | True | LOC110520160 |
| TU306341 | other | downstream | 1109915 | 50440205 ~ 50442872 (-) | True | LOC110520139 |
| TU305117 | other | downstream | 1651249 | 49900173 ~ 49901538 (-) | True | LOC110520121 |
| TU305027 | other | downstream | 1681142 | 49867217 ~ 49871645 (-) | True | LOC110520119 |
| TU307458 | other | upstream | 43464 | 51597399 ~ 51599898 (-) | False | il1rl1 |
| TU307459 | other | upstream | 44000 | 51597935 ~ 51600230 (-) | True | il1rl1 |
| TU309282 | other | upstream | 1154248 | 52708183 ~ 52708816 (-) | True | LOC110520182 |
| TU309646 | other | upstream | 1695991 | 53249926 ~ 53251084 (-) | True | G272713 |
| TU311493 | other | upstream | 3125983 | 54679918 ~ 54682805 (-) | True | G274344 |
