Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036974642.1 |
| length | 7769 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 10 |
| gene id | LOC110504309 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55592364 ~ 55715785 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006629 | lipid metabolic process | biological_process |
| GO:0035556 | intracellular signal transduction | biological_process |
| GO:0032228 | regulation of synaptic transmission, GABAergic | biological_process |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| GO:0070679 | inositol 1,4,5 trisphosphate binding | molecular_function |
| GO:0050811 | GABA receptor binding | molecular_function |
| GO:0004435 | phosphatidylinositol phospholipase C activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU312633 | lncRNA | downstream | 232 | 55591744 ~ 55592132 (-) | True | G275376 |
| TU312625 | lncRNA | downstream | 7010 | 55585126 ~ 55585354 (-) | True | G275368 |
| TU312623 | lncRNA | downstream | 10729 | 55581389 ~ 55581635 (-) | True | G275366 |
| TU312620 | lncRNA | downstream | 13876 | 55578157 ~ 55578488 (-) | True | G275363 |
| TU312618 | lncRNA | downstream | 14463 | 55577686 ~ 55577901 (-) | True | G275361 |
| TU313794 | lncRNA | upstream | 2031 | 55717816 ~ 55718120 (-) | True | G276397 |
| TU313797 | lncRNA | upstream | 5808 | 55721593 ~ 55721866 (-) | True | G276400 |
| TU313798 | lncRNA | upstream | 6406 | 55722191 ~ 55722410 (-) | True | G276401 |
| TU313841 | lncRNA | upstream | 17715 | 55733500 ~ 55733834 (-) | True | G276443 |
| TU313843 | lncRNA | upstream | 22585 | 55738370 ~ 55738588 (-) | True | G276445 |
| XM_036974634.1 | mRNA | downstream | 197361 | 55392189 ~ 55395003 (-) | False | LOC110520233 |
| XM_021584437.2 | mRNA | downstream | 201032 | 55389101 ~ 55391332 (-) | True | crygs2 |
| XM_021597399.2 | mRNA | downstream | 210203 | 55375915 ~ 55382161 (-) | True | LOC110520232 |
| XM_036974626.1 | mRNA | downstream | 220697 | 55357367 ~ 55371667 (-) | False | armc8 |
| XM_021597405.2 | mRNA | upstream | 63718 | 55779503 ~ 55788119 (-) | False | LOC110520238 |
| XM_036974651.1 | mRNA | upstream | 63718 | 55779503 ~ 55821242 (-) | False | LOC110520238 |
| XM_021597406.2 | mRNA | upstream | 72616 | 55788401 ~ 55792175 (-) | False | LOC110520238 |
| XM_036974648.1 | mRNA | upstream | 72616 | 55788401 ~ 55821210 (-) | True | LOC110520238 |
| XM_036974661.1 | mRNA | upstream | 174597 | 55890382 ~ 55915483 (-) | False | LOC110520241 |
| TU312498 | other | downstream | 180877 | 55410143 ~ 55411487 (-) | False | G275250 |
| TU312500 | other | downstream | 180877 | 55410143 ~ 55411487 (-) | True | G275250 |
| TU312299 | other | downstream | 473152 | 55103494 ~ 55119212 (-) | True | LOC110520227 |
| TU311493 | other | downstream | 909559 | 54679918 ~ 54682805 (-) | True | G274344 |
| TU309646 | other | downstream | 2341280 | 53249926 ~ 53251084 (-) | True | G272713 |
| TU315090 | other | upstream | 1554997 | 57270782 ~ 57297762 (-) | True | si:dkey-91i10.3 |
| TU315188 | other | upstream | 1687199 | 57402984 ~ 57403575 (-) | True | G277673 |
| TU315276 | other | upstream | 1868601 | 57584386 ~ 57589183 (-) | True | G277749 |
| TU322065 | other | upstream | 6998790 | 62714575 ~ 62715177 (-) | True | G284018 |
| TU324819 | other | upstream | 9253764 | 64969549 ~ 64970755 (-) | True | G286522 |
