RNA id: XM_021597451.2


Basic Information

Item Value
RNA id XM_021597451.2
length 4735
RNA type mRNA
GC content 0.52
exon number 21
gene id adcy5
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 56683064 ~ 56818530 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATGTCCAGATCGAACAGTGTGAGCCCGCCCGAAGTCGGTGCGCCTGGGCTGAGGGGAGGGACTGAGCTCAGATCTGCTTGGGGCGAGTCTGAGTCTATTGCAAACGGATGCCCATACTCGGCTAGATCTCCGAGCAAAAAACTCGCCCGGTCGAACAgcagatggagggaaggagatgatGATCCCGAACAGCAGCCCGGACCAGGACGAGCCACGACAACGGTTAGCAGGGTCAGTTTTAGGTCTAGATCTGCGTGGCAAGAGCATGGGACTGGGGAAGAGAGCCGAAACAACAACCGATCTTCCCCAAGGCACGCAGATGGAGCCGGGGAAGTGAGACCCAAATCGGTGGAATTGGGCTTGGAAGACCGGAGAGTGAAGGGCTCCAAACCCGAGGAGGAACTCATGCCTGAAGTTCACCTTTCCATGGTTGCGTGCTGCAGCAGCGCGATGCAGATTTTCAGATCCAAGAAATTCCAATCGGAGAAGTTGGAGAGGCTGTACCAGCGTTACTTTTTCCGACTCAACCAGAGCAGTTTGACCATGCTCATGGCCGTTTTGGTGCTCATGTGCGCGGTCATGCTGACATTCCATTGCGCGGGGGGAGTATGCAGGATAACTTACGTGGTGGTCTTTTCCTTAGCCATCTTACTTATCCTCATATTGATGGTTGTGTGCAATCGGAACGGGTTTCATCAGGACCACATGTGGATAGTCTGCTATGTGGTCATTCTAGTCGTGCTGGTTGTACAAGTGATCGGGGTGCTGCTtgttcagccgcaaagtggttCTGAGGGAATTTGGTGGACGGTGTTCTTTATCCATGTCATCTACACTCTGCTCCCGGTTCGGATGCGGGCTGCGGTTATCACTGGAGTTATACTGTCTACCATCCATGTGGCGGTGTCTTGGAAGTTAAACGAAAGGGATGCCTTTATATGGAAGCAGatAGTGTCCAACGTCCTGATCTTCTCCTGTTCTAACATCGTGGGCGTGTGTACCCACTACCCAGCCGAGGGCTCCCAGAGACAAGCCTTCCAGGAGACCAGGGAGTGCATCCAGGCTCGCCTCCACTCACAGAGGGAGAACCAGCAGCAGGAGCGTCTCCTGCTCTCCGTGCTTCCCCGTCATGTTGCCATGGAGATGAAAGCTGATATTAACGCTAAGCAGGAAGACATGATGTTTCACAAGATCTACATCCAGAAGCACGACAACGTCAGCATCCTGTTTGCAGACATCGAGGGGTTTACCAGTCTGGCGTCCCAGTGTACTGCCCAGGAGCTGGTGATGACACTCAATGAACTTTTCGCCCGCTTCGACAAGCTGGCCGCGGAGAACCACTGCCTGCGTATTAAGATCCTGGGAGACTGCTACTACTGTGTGTCTGGGCTGCCAGAGGCCCGGGCCGACCACGCATCCTGCTGTGTGGAGATGGGTGTGGACATGATCGAGGCCATCTCgctCGTGAGAGAGGTCACAGGGGTCAATGTGAACATGCGTGTGGGCATCCATAGCGGCAGGGTCCACTGTGGGGTACTGGGACTCAGGAAGTGGCAGTTTGACGTGTGGTCCAACGATGTCACGTTAGCTAATCACATGGAGGCTGGGGGCGCGGCAGGGCGGATCCACATCACCAAGGCCACTCTGAACTACCTGAATGGAGACTATGACGTGGAGCCAGgatcaggaggagagaggaacgtCTATCTGAAGAGGCACAACATCGAAACCTACCTCATCGTGGGCTGCAGCCAGAAAAGGAAAGAAGAGAAGGCGATGATAGCGAAAATGAACCGTCAACGCGCCAACTCTGTCTCCCACAACACGGGCCACTGGACCGACCGACCTTTCTACAACCATGGAGGAAACCAGATCTCCAAGGAGATGAAGAGGATGGGATTTGAAGACCCCAAGGACAAAAACACGCAGGAAAACCTGAACCCAGAGGACGAGGTGGACGAGTTCCTAGGGAGAGCCATCGACGCCAGGAGTATCGACCGGCTACGCTCAGAACATGTCAAGAAGTTCCTGCTGACCTTCAGAGAACCAGACCTGGAGAAGAAGTACTCCAAACAAGTGGACTCCAGATTTGGAGCATACGTGGCCTGCGCCTCTCTCGTCTTCCTCTTCATATGTTTCATCCAGATTGTCATTGTACCACAcTCCACTCTGATGATTGGGTTCTACACCACCTGTCTGATCATCCTGGTGGCTGTCATGTTTGTCTCAGCAGTCTACTCCTGCTTTGGGTTTTTCCCGGTGCCTCTCCAGACCTTGTCCAAGAGGATCGTCCAGTCCAGACTCAACAGCACCCTGGTGGGAGTCTTCACCATCATCctggtctttctctctgccttcaTCAACATTTTCACCTGCAGTACTGGAGACCTGAGGACTTGTCTGAGCTGGGAGCTGAACATCAGTCGCAGCAGTGTGAACGCCTGCCATGCACGCAGCCTAAACTACACCCTTGAATCACTAGACGGCTTCTGTGGCAGTCCCTCACCCAACTGCAACttccctgagTACTTCTCTTCCTGTGTGTTGTTGAGTCTGCTGGCCAGCTCAGTCTTCCTGCAGGTCAGCAGCATAGGTAAACTCCTACTCATGCTCTTCATCGAGATCTTTTACGTCCTCATCATGGAAGTGCCAGAGGTCAGCCTGTTCGACAACGTAGACCTGCTGGTCATGGCCAACGCTATTGAGCATATAAATGGAACAAGCTGTGTGATGGACTCTAAGGTCCCTCTGAAGATCATGACTCCTGTAGTTATCACTGTTTTCGTCCTGGCCTTGTATCTACACGCCCAGCAGGTGGAGTCCACAGCCAGACTCGACTTCCTCTGGAAACtacaggccacagaggagaaagaggagatggaggagctaCAGGCCTACAACCGTCGCCTCCTCCACAACATCCTCCCCAAAGACGTGGCTGCCCACTTCCTGGCGCGGGAGCGTCGGAACGACGagctctactaccagtcctgtgaGTGTGTGGCCGTCATGTTCGCCTCCATCTCCAACTTCTCTGAATTCTACGTAGAGCTGGAAGCCAACAACGAGGGAGTGGAGTGTCTCCGGCTGCTCAACGAGATCATCGCAGACTTTGACGAGATCATCAGTGAGGACCAGTTCCGCCAGCTGGAGAAGATAAAGACCATTGGCAGTACCTACATGGCTGCCTCTGGCCTCAACGATTCTACCTACGACAAGGAAGGCCGCTCACACATCAGAGCCCTGGCAGATTACGCCATGAGACTCATGGATCAGATGAAGTACATTAACGAACACTCCTTCAATAACTTCAAGATGAAGATAGGTCTGAACATGGGTCCAGTGGTGGCTGGGGTGATCGGGGCCAGGAAGCCCCAGTATGATATCTGGGGGAATACCGTCAACGTTGCCAGCCGCATGGACAGCACTGGTGTACCTGACAGGATCCAGGTGACCTCTGACCTGTACAATGTGCTGAACTCCTATAACTACACACTAGAGTGCCGAGGCCTGGTCAAGGTGAAGGGTAAAGGAGAGATGCAGACCTACTTCCTCACTGGAGGACCTCCCAGCAGTTAACACCCagggtgtgtctgaaatggcacactattccatgtatagtgcactacttttgaccagggcccataggtctctggtcaaaagtagtgcactacatagggaatagggtgccatttcagacacagcctaTTCAAAAGCAGCCCCAGTAACGGACTGACACTGGCGCAGGAGAAGTAGAAGGGGGGGCTGTTGGACTAAAAGGGGCTAACCCCCAAGCCTTTGACGAGCAGGTTCATAGACCTGTGTTAGCTTGGGGAACTGACTGCCTCCCACCCATACCCCTTTTCCAACATTTAGCCCCTCCCTACCTGCACAGGTTAGCCTCCGATTGGCCCAGAGTGAAGGAGACCACACCCAGCATCCACTCGGATTGGGGGAAAGTGACAGAGGGAGGGGCTTAGAGGGCATGGGTTCGCTGAGGAGACCAAAGAAGTCCTAGACTGCAGAAGACAGACACATTATGACAGCAGTCTCTCACAGTCTTATTCCCACCAGTCAGTGTGAGATAAGGAACCACTTACAGCCAATCATCTcacagtactgtaggtctctgTAAGGTTCTCTGAGGAAATCGCTACACTACCTGTGTTGTCATAGACATTCTGCTGAAGGATCTAAGTCGATCCAAAAAAAACCTGCATGAAGACACTGAAAACCATATATACACGTAAAACACACACTGTTttatctgtatatatatatataagtatatatatGTGAAAACAAACTGTTTTTGTCCATACAGTCCATGTATGTTGTCTTTGTACACTGTTGTACTGTTAAGTGGTACAGATATTACAATTCTCCATACAATGGGTATACTACACACTAACATGGCCATCGCCAGCCAGTACAGCAACACTGTCAAACCCTTTACCAGAGTTGGTCAGAGAGGAAGGAGCAGTGTGTTTAATCACCAGTAGGGGTCCTAGGTGGGCCGTTAACCTGGCAGGGTACTTGAACGACCAGAGTGAGACTGCTCTGCTCCTCTCCGTGTGAGTTTACAGAACTCTTCCACAGTCTACTTTACACACAGgcgcaaacacacagacaaacgtgcagacacacacacgcagaaacacacacacacatatgcgctggacaacacacatacagtggcaagaaaaagtatgtgaagcctttggaattacctgga

Function

GO:

id name namespace
GO:0045471 response to ethanol biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0009190 cyclic nucleotide biosynthetic process biological_process
GO:0001932 regulation of protein phosphorylation biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004016 adenylate cyclase activity molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K08045 ADCY5; adenylate cyclase 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU313325 lncRNA upstream 55658 56628314 ~ 56628627 (+) True G275953
TU313309 lncRNA upstream 71655 56608773 ~ 56612630 (+) True G275937
TU313305 lncRNA upstream 80360 56600813 ~ 56603925 (+) True G275933
TU313262 lncRNA upstream 132040 56550750 ~ 56552245 (+) True G275903
TU313248 lncRNA upstream 132562 56546797 ~ 56551723 (+) True G275894
TU313520 lncRNA downstream 100175 56918705 ~ 57001444 (+) False sema5ba
TU313511 lncRNA downstream 100241 56918771 ~ 57001309 (+) False sema5ba
TU313513 lncRNA downstream 100241 56918771 ~ 57001309 (+) False sema5ba
TU313518 lncRNA downstream 100241 56918771 ~ 57001964 (+) True sema5ba
TU313543 lncRNA downstream 127623 56946153 ~ 57027283 (+) True G276151
XM_021597449.2 mRNA upstream 3718 56668133 ~ 56680567 (+) True LOC110520266
XM_036974739.1 mRNA upstream 189441 56463388 ~ 56494844 (+) False rif1
XM_036974740.1 mRNA upstream 189441 56463388 ~ 56494844 (+) False rif1
XM_036974741.1 mRNA upstream 189441 56463388 ~ 56494844 (+) True rif1
XM_021597439.2 mRNA upstream 221489 56454004 ~ 56462796 (+) True tnfaip6
XM_021597455.2 mRNA downstream 98922 56917452 ~ 57105517 (+) False sema5ba
XM_021597456.2 mRNA downstream 98922 56917452 ~ 57105517 (+) False sema5ba
XM_021597461.2 mRNA downstream 98922 56917452 ~ 57105517 (+) False sema5ba
XM_036974744.1 mRNA downstream 98922 56917452 ~ 57105517 (+) False sema5ba
XR_005050753.1 mRNA downstream 98922 56917452 ~ 57105517 (+) False sema5ba
TU312833 other upstream 768152 55915329 ~ 55916133 (+) False G275553
TU312838 other upstream 768152 55915512 ~ 55916133 (+) False G275553
TU312836 other upstream 768152 55915744 ~ 55916133 (+) False G275553
TU312821 other upstream 783542 55900194 ~ 55900743 (+) True G275542
TU312074 other upstream 1308759 55374546 ~ 55375526 (+) True LOC110520231
TU314786 other downstream 446037 57264567 ~ 57264892 (+) True G277296
TU315509 other downstream 971204 57789734 ~ 57790332 (+) True G277973
TU317976 other downstream 3234186 60052716 ~ 60054417 (+) False G280315
TU317977 other downstream 3234186 60052716 ~ 60054417 (+) True G280315
TU318844 other downstream 3468858 60287388 ~ 60290567 (+) True G281141

Expression Profile