Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU314907 |
| length | 531 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 1 |
| gene id | clasp1a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 57446143 ~ 57554278 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU314940 | lncRNA | upstream | 45230 | 57480128 ~ 57505477 (+) | True | G277441 |
| TU314946 | lncRNA | upstream | 61563 | 57488214 ~ 57489144 (+) | True | G277445 |
| TU314845 | lncRNA | upstream | 108198 | 57441561 ~ 57442509 (+) | True | G277353 |
| TU314844 | lncRNA | upstream | 111395 | 57437086 ~ 57439312 (+) | True | G277352 |
| TU314899 | lncRNA | upstream | 134931 | 57414571 ~ 57415776 (+) | True | G277404 |
| TU314906 | lncRNA | downstream | 163 | 57551400 ~ 57554278 (+) | True | clasp1a |
| TU314975 | lncRNA | downstream | 7620 | 57558857 ~ 57559122 (+) | True | G277473 |
| TU314977 | lncRNA | downstream | 14907 | 57566144 ~ 57566458 (+) | True | G277475 |
| TU314958 | lncRNA | downstream | 19966 | 57571203 ~ 57571395 (+) | False | LOC110520283 |
| TU314957 | lncRNA | downstream | 20007 | 57571244 ~ 57571427 (+) | True | LOC110520283 |
| LOC110520280 | mRNA | upstream | 115433 | 57427425 ~ 57435274 (+) | True | LOC110520280 |
| XR_005051427.1 | mRNA | upstream | 116437 | 57434145 ~ 57434270 (+) | True | LOC118936397 |
| XR_005051426.1 | mRNA | upstream | 120014 | 57430568 ~ 57430693 (+) | True | LOC118964378 |
| XM_021597468.2 | mRNA | upstream | 145084 | 57335037 ~ 57405623 (+) | False | LOC110520279 |
| XM_021597467.2 | mRNA | upstream | 145084 | 57358875 ~ 57405623 (+) | False | LOC110520279 |
| XM_021597471.2 | mRNA | downstream | 19983 | 57571220 ~ 57589227 (+) | False | LOC110520283 |
| XM_021597472.2 | mRNA | downstream | 19983 | 57571220 ~ 57589227 (+) | False | LOC110520283 |
| NM_001165088.2 | mRNA | downstream | 399862 | 57951099 ~ 57969839 (+) | True | ralb |
| XR_005051240.1 | mRNA | downstream | 424828 | 57976065 ~ 57978805 (+) | True | LOC118964187 |
| XM_036965026.1 | mRNA | downstream | 488620 | 58039857 ~ 58470590 (+) | False | LOC110504354 |
| TU314786 | other | upstream | 285815 | 57264567 ~ 57264892 (+) | True | G277296 |
| TU312833 | other | upstream | 1634574 | 55915329 ~ 55916133 (+) | False | G275553 |
| TU312838 | other | upstream | 1634574 | 55915512 ~ 55916133 (+) | False | G275553 |
| TU312836 | other | upstream | 1634574 | 55915744 ~ 55916133 (+) | False | G275553 |
| TU312821 | other | upstream | 1649964 | 55900194 ~ 55900743 (+) | True | G275542 |
| TU315509 | other | downstream | 238497 | 57789734 ~ 57790332 (+) | True | G277973 |
| TU317976 | other | downstream | 2501479 | 60052716 ~ 60054417 (+) | False | G280315 |
| TU317977 | other | downstream | 2501479 | 60052716 ~ 60054417 (+) | True | G280315 |
| TU318844 | other | downstream | 2736151 | 60287388 ~ 60290567 (+) | True | G281141 |
| TU319365 | other | downstream | 3189002 | 60740239 ~ 60757350 (+) | True | G281591 |
