RNA id: NM_001124291.1



Basic Information


Item Value
RNA id NM_001124291.1
length 1114
RNA type mRNA
GC content 0.51
exon number 9
gene id myl1
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 60277245 ~ 60286080 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AAGCTTACGCGGGAACTGTCTGAATTATCGGTGAAGTAGCTAACTAACTTACTCTCTGCTAAAATGGCACCCAAGAAGGACGCTAAGGCGGCACCCGCAAGAAAGCCGAGCCTGCAAAGGGCCGCACCTGCTCCCGCACCCGAGCCTGATGTGGTAGCTGCTCCCCCTGCACTTGACTTGTCCAAAGTCAAGGTGGAGTTCACTCCCGACCAGCATGAGGACTACAAGGAGGCTTTCGGTCTCTTTGACAGGGTGGGTGACTCGAAGGTGGCTTACAACCAGGTCGCTGATATCATGCGCGCCCTGGGACAGAACCCTACCAACAAGGAGGTGCGCAAAGTCCTGGGCAACCCCTCCGATGAAgACATGGCCGCCAAGAGATTGGAGTTCGAGGCCTTCCTTCCCATGCTCCAGCACATTGTCAACGACCCAAACAAGGGAACCTTCGATGACTACGTTGAGGGTCTGCGCGTCTTTGACAAGGAGGGCAACGGCACCGTGATGGGAGCTGAGCTGCGTATTGTTCTTGGAACACTGGgtgAGAAGATGAGCGAGGCTGAGATTGATGGCCTCATGCAAGGACAGGAGGACGAGAACGGCAGTATTAACTTCGAGGCCTTTGTCAAGCACATCATGTCTATTTAAGGATCCTCCAGCTGCAGACCCAACGGTGTCAGGACATCCACTCCCCCACAGTTCTTCACCACCACCTGATAAAGAGACAGGGGGAAAATGGACTATGAGATGTAATTTTTGTTGTTAGTTTCATTCTTTTTCTTTTGGTCTGACTCCGACCTCCGACTCTGCTCTCTATTTTCCTCGATTGGAAGCTGTCCTTTTTTCTCTCCAGCCAACCGTCAGATGCTCTTGTTGTCTTGTCCCCTGGTATGCCTCTCCACCGTGGGTCGGTGAGGGAAAAGAGGTAGGGATGACTCACTGAAACGTTGCAGTAGTTAAGATAAACCTTCCATCACTTACTTACTCCCTGGATTGGGCCAGTAGAGGTGACTGGCTTTGCTCAAGACTGGCCATCAAAACTCACTCTCCCTATCTATCCCCTCAGTCTTAATTTATTTATCTCCTCTGCTATTTCACATAATAAACTTTTCAAAAA

Function


GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K05738 MYL1; myosin light chain 1

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU318829 lncRNA upstream 14862 60262368 ~ 60262582 (+) True G281128
TU318782 lncRNA upstream 61332 60215884 ~ 60216112 (+) True G281082
TU318754 lncRNA upstream 109002 60168239 ~ 60168442 (+) True G281054
TU318750 lncRNA upstream 111296 60164628 ~ 60166148 (+) True G281052
TU318747 lncRNA upstream 111613 60164628 ~ 60165831 (+) False G281052
TU318843 lncRNA downstream 1311 60287388 ~ 60303967 (+) False G281141
TU318846 lncRNA downstream 4605 60290682 ~ 60292657 (+) False G281142
TU318847 lncRNA downstream 4605 60290682 ~ 60292657 (+) True G281142
TU318872 lncRNA downstream 36076 60322153 ~ 60323132 (+) True G281166
TU318906 lncRNA downstream 93131 60379208 ~ 60379424 (+) True G281197
XR_005039919.1 mRNA upstream 7545 60267642 ~ 60269899 (+) True LOC110505381
XM_036974796.1 mRNA upstream 225150 59870559 ~ 60052294 (+) True erbb4b
XM_021597499.2 mRNA upstream 695488 59556678 ~ 59581956 (+) False ikzf2
XR_005051347.1 mRNA downstream 96597 60382674 ~ 60383352 (+) True LOC118964303
XM_021597524.2 mRNA downstream 348462 60634539 ~ 60654313 (+) True tgfbr2l
XM_036974822.1 mRNA downstream 1045282 61331359 ~ 61370875 (+) False LOC110520315
XM_036974823.1 mRNA downstream 1045466 61331543 ~ 61370875 (+) True LOC110520315
XM_036974824.1 mRNA downstream 1189799 61475876 ~ 61505428 (+) True LOC110520316
TU317976 other upstream 223027 60052716 ~ 60054417 (+) False G280315
TU317977 other upstream 223027 60052716 ~ 60054417 (+) True G280315
TU315509 other upstream 2487112 57789734 ~ 57790332 (+) True G277973
TU314786 other upstream 3012552 57264567 ~ 57264892 (+) True G277296
TU312836 other upstream 4361311 55915744 ~ 55916133 (+) False G275553
TU318844 other downstream 1311 60287388 ~ 60290567 (+) True G281141
TU319365 other downstream 454162 60740239 ~ 60757350 (+) True G281591
TU319499 other downstream 605447 60891524 ~ 60893778 (+) False G281714
TU319500 other downstream 605447 60891524 ~ 60893778 (+) True G281714
TU319833 other downstream 747689 61033766 ~ 61037105 (+) True G281996

Expression Profile