RNA id: XM_036965051.1


Basic Information

Item Value
RNA id XM_036965051.1
length 648
RNA type mRNA
GC content 0.72
exon number 2
gene id LOC118944692
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63164294 ~ 63167048 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATGGCTGAAAAGCTGGGCGTAGTATCTCTGGTGATCTGtacatcaagCCGCTCACCCCCAGCCCCTCACCACCAGCCGCTCACCACCAGCCCCTCACCACCAGCACCTCACCCCCAGCCCCTCACCACCAGCCCCTCACCACCAGCCGCTCACCACCAGCACCTCACCCCCAGCACCTCACCCCCAGCCGCTCACCCCCAGCCCCTCACCACCAGCCGCTCACCCCCAGCCCCTCACCACCAGCCGCTCACCCCCAGCCCCTCACCCCCAGCCCCTCACCACCAGCCCCTCACCCCCAGCCCCTCACCCCCAGCCGCTCACCCCCAGCCGCTCACCCCCAGCCCCTCACCCCCAGCCCCTCACCCCCAGCACCTCACCCCCAGCCGCTCACCCCCAGCCCCTCACCACCAGCCGCTCACCCCCAGCCCCTCATCCCCAGCCGCTCACCCCCAGCCCCTCACCCCCAGCCCCTCACCCCCAGCCGCTCACCCCCAGCCGCTCACCCCCAGCCCCTCACCCCCAGCCCCTCACCCCCAGCCCCTCACCCCCAGCCGCTCACCCCCAGCCGCTCACCCCCAGAGACTTACAGGGTTTGTAACTCAGTCCTGCTCCCTGACTAGACACCCGAGAGCGCAGCAGTCCCCCTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU322826 lncRNA downstream 1499 63162562 ~ 63162795 (-) True G284669
TU322823 lncRNA downstream 5584 63158416 ~ 63158710 (-) True G284666
TU322614 lncRNA downstream 22975 63141112 ~ 63141319 (-) True G284481
TU322607 lncRNA downstream 31738 63132313 ~ 63132556 (-) True G284474
TU322605 lncRNA downstream 32801 63131272 ~ 63131493 (-) True G284472
TU322889 lncRNA upstream 103419 63270467 ~ 63272608 (-) True G284729
TU322892 lncRNA upstream 104446 63271494 ~ 63271776 (-) True G284731
TU322849 lncRNA upstream 150218 63317266 ~ 63318062 (-) True G284689
TU322939 lncRNA upstream 218202 63385250 ~ 63385463 (-) True G284775
TU322942 lncRNA upstream 222472 63389520 ~ 63389759 (-) True G284778
XM_036974898.1 mRNA downstream 48934 63100074 ~ 63115360 (-) True chmp2ba
XM_021597623.2 mRNA downstream 107561 63028878 ~ 63056733 (-) True LOC110520361
XM_021597622.2 mRNA downstream 139013 63011134 ~ 63025281 (-) True LOC110520360
XM_036974886.1 mRNA downstream 220776 62869748 ~ 62943518 (-) True LOC110504409
XM_021597620.2 mRNA downstream 305299 62855879 ~ 62858995 (-) True LOC110520358
XM_036974896.1 mRNA upstream 100070 63267118 ~ 63280956 (-) False epsti1
XM_036974893.1 mRNA upstream 100070 63267118 ~ 63282962 (-) False epsti1
XM_036974897.1 mRNA upstream 100070 63267118 ~ 63282967 (-) False epsti1
XM_036974895.1 mRNA upstream 100070 63267118 ~ 63282971 (-) False epsti1
XM_036974894.1 mRNA upstream 100888 63267936 ~ 63282972 (-) True epsti1
TU322065 other downstream 449117 62714575 ~ 62715177 (-) True G284018
TU315276 other downstream 5575111 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 5760719 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 5866532 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312500 other downstream 7752807 55410143 ~ 55411487 (-) True G275250
TU324819 other upstream 1802501 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 1847211 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 1887652 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 1887652 65054700 ~ 65075985 (-) True G286638
TU325334 other upstream 2068132 65235180 ~ 65235908 (-) True G286953