Item | Value |
---|---|
RNA id | XR_005051354.1 |
length | 814 |
RNA type | mRNA |
GC content | 0.39 |
exon number | 2 |
gene id | LOC110520406 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 65437563 ~ 65459000 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
id | name | namespace |
---|---|---|
GO:0006468 | protein phosphorylation | biological_process |
GO:0005524 | ATP binding | molecular_function |
GO:0004674 | protein serine/threonine kinase activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU325444 | lncRNA | downstream | 9622 | 65448068 ~ 65448417 (-) | True | G287043 |
TU325442 | lncRNA | downstream | 11737 | 65446079 ~ 65446302 (-) | True | G287041 |
TU325401 | lncRNA | downstream | 118144 | 65338173 ~ 65339895 (-) | True | G287005 |
TU325367 | lncRNA | downstream | 153541 | 65290732 ~ 65304498 (-) | True | G286979 |
TU325375 | lncRNA | downstream | 157115 | 65300694 ~ 65300924 (-) | True | G286986 |
TU325474 | lncRNA | upstream | 67963 | 65526948 ~ 65532451 (-) | True | G287067 |
TU325492 | lncRNA | upstream | 95545 | 65554530 ~ 65554731 (-) | True | G287081 |
TU325494 | lncRNA | upstream | 97442 | 65556427 ~ 65556658 (-) | True | G287083 |
TU325508 | lncRNA | upstream | 109035 | 65568020 ~ 65568248 (-) | True | G287097 |
TU325521 | lncRNA | upstream | 120287 | 65579272 ~ 65579563 (-) | True | G287110 |
XM_036974949.1 | mRNA | downstream | 25886 | 65392849 ~ 65432153 (-) | False | xpo4 |
XM_036974950.1 | mRNA | downstream | 25894 | 65393502 ~ 65432145 (-) | True | xpo4 |
XM_021597703.2 | mRNA | downstream | 67708 | 65387523 ~ 65390331 (-) | False | eef1akmt1 |
XM_036974948.1 | mRNA | downstream | 67708 | 65387523 ~ 65390331 (-) | True | eef1akmt1 |
XM_021597701.2 | mRNA | downstream | 67710 | 65387523 ~ 65390329 (-) | False | eef1akmt1 |
XM_036974951.1 | mRNA | upstream | 13300 | 65472285 ~ 65475542 (-) | False | ska3 |
XM_021597708.2 | mRNA | upstream | 13300 | 65472285 ~ 65476510 (-) | True | ska3 |
XM_021597709.2 | mRNA | upstream | 21155 | 65480140 ~ 65484785 (-) | True | hcn5 |
XR_005039939.1 | mRNA | upstream | 26899 | 65485884 ~ 65486801 (-) | True | LOC118944602 |
XR_002472975.2 | mRNA | upstream | 45000 | 65503985 ~ 65508384 (-) | False | pla1a |
TU325443 | other | downstream | 10756 | 65446825 ~ 65447283 (-) | True | G287042 |
TU325373 | other | downstream | 157622 | 65298207 ~ 65300417 (-) | True | G286985 |
TU325334 | other | downstream | 222131 | 65235180 ~ 65235908 (-) | True | G286953 |
TU324969 | other | downstream | 382054 | 65054700 ~ 65075985 (-) | True | G286638 |
TU324968 | other | downstream | 402828 | 65054700 ~ 65055211 (-) | False | G286638 |
TU325523 | other | upstream | 120806 | 65579791 ~ 65580495 (-) | True | G287112 |
TU327202 | other | upstream | 1383686 | 66842671 ~ 66842881 (-) | True | G288578 |
TU328494 | other | upstream | 2167847 | 67626832 ~ 67633493 (-) | True | G289678 |
TU328453 | other | upstream | 2424767 | 67883752 ~ 67886232 (-) | True | G289653 |
TU328904 | other | upstream | 2747605 | 68206590 ~ 68208395 (-) | True | si:ch211-214p13.7 |