Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU325200 |
| length | 530 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 4 |
| gene id | LOC110520411 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 65489157 ~ 65491432 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0046688 | response to copper ion | biological_process |
| GO:0006825 | copper ion transport | biological_process |
| GO:0005758 | mitochondrial intermembrane space | cellular_component |
| GO:0016531 | copper chaperone activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU325234 | lncRNA | upstream | 7009 | 65481281 ~ 65482260 (+) | True | G286869 |
| TU325212 | lncRNA | upstream | 34928 | 65453705 ~ 65454341 (+) | True | G286849 |
| TU325206 | lncRNA | upstream | 44715 | 65444312 ~ 65444554 (+) | True | G286843 |
| TU325181 | lncRNA | upstream | 78352 | 65407736 ~ 65410917 (+) | True | G286824 |
| TU325073 | lncRNA | upstream | 94484 | 65394376 ~ 65394785 (+) | True | G286726 |
| TU325240 | lncRNA | downstream | 16615 | 65507678 ~ 65508356 (+) | True | G286875 |
| TU325249 | lncRNA | downstream | 19544 | 65510607 ~ 65512345 (+) | True | G286882 |
| TU325245 | lncRNA | downstream | 42539 | 65533602 ~ 65534662 (+) | True | G286879 |
| TU325496 | lncRNA | downstream | 67015 | 65558078 ~ 65558292 (+) | True | G287085 |
| TU325504 | lncRNA | downstream | 73606 | 65564669 ~ 65564900 (+) | True | G287093 |
| XM_036974945.1 | mRNA | upstream | 102563 | 65362737 ~ 65386706 (+) | False | ift88 |
| XM_036974952.1 | mRNA | downstream | 896 | 65491959 ~ 65503791 (+) | False | popdc2 |
| XM_021597715.2 | mRNA | downstream | 1085 | 65492148 ~ 65503791 (+) | True | popdc2 |
| XM_021597724.2 | mRNA | downstream | 91972 | 65583035 ~ 65599863 (+) | False | wars2 |
| XM_021597723.2 | mRNA | downstream | 92007 | 65583070 ~ 65599863 (+) | True | wars2 |
| XM_036974958.1 | mRNA | downstream | 123122 | 65614185 ~ 65637086 (+) | False | LOC110520416 |
| TU325080 | other | upstream | 203713 | 65260445 ~ 65285556 (+) | True | zmym2 |
| TU325057 | other | upstream | 322689 | 65161391 ~ 65166580 (+) | True | LOC110520396 |
| TU325026 | other | upstream | 379632 | 65109256 ~ 65109637 (+) | True | G286679 |
| TU324010 | other | upstream | 1181909 | 64306512 ~ 64307360 (+) | True | G285763 |
| TU323408 | other | upstream | 1405287 | 64071432 ~ 64083982 (+) | True | G285203 |
| TU325972 | other | downstream | 543357 | 66034420 ~ 66036202 (+) | True | LOC118964312 |
| TU326785 | other | downstream | 1058759 | 66549822 ~ 66550487 (+) | True | G288252 |
| TU326969 | other | downstream | 1240223 | 66731286 ~ 66733797 (+) | False | G288430 |
| TU327020 | other | downstream | 1292310 | 66783373 ~ 66784786 (+) | True | LOC110505407 |
| TU327305 | other | downstream | 1502108 | 66993171 ~ 66994131 (+) | True | G288674 |
