RNA id: XM_036975153.1


Basic Information

Item Value
RNA id XM_036975153.1
length 1816
RNA type mRNA
GC content 0.46
exon number 6
gene id zgc:92313
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73739671 ~ 73759734 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTTAGAGATTTTCTGACGAACGTGGTCCACAGGTCTGGTTCTCCAAACCTTGTATTAAATGGAGGCATAAACCAAGAGGTTGTCAGTAACCGTATTGTTCTCTTTGTTTTCGCAAGGCATACATTTTGTAGACATTTTAATACGTATTTTTAACCATTCACACGCCCTGAAGGATTTCAACACCGCTATTGTGGAAAGTGGGTTTCCGTGAAAATTAGCTGCTGTACGGACGATTTGATTTAGAACACAAGACTTCTCAAGAATACTACCGTTTTTGGGGGGGAAATTTGGGGCTACCCGAAATTCGCGTGTCCCTCGAAAATGATACCGAATTCAGACTTTTATGTTAGACTTCTTTGGTGTTTCACAGGTGTCATGGTTTGTCACGCTCAGGAAGAGTGTGGTCAACCACCCATGGGCAACAGGATTGTGGGAGGAGTAGATGCATCAATGGGGGCATGGCCGTGGCAAGTGGATATTCAGACAGCGAAGGATGGCCATATCTGTGGAGGCACCATCATCACTAAGGACTGGGTGCTGTCTGCTGCCCACTGCTTCCCAAATCAGTTCGACGTGTCGGGCTACACCCTCTATGTTGGCCGTCACCGGCTCAACAGCTGGAACCCTAACGAGATATCGTACCTCGTGGAGCGCGTCGTGATCCCGTCCGGCTACTCTGACCCAAGTTTGGGACAGGACCTGGCCTTGGTGCAGCTGCAGAGACCCATCGTCTGGTCGGCGTATGTCCATCCTGTTTGTCTTCCTGACGCCGGGACACTGTTCCCTGGGGACCTTCCCTGCTACATCACAGGCTGGGGAAACATCCGCGATGGGGTCGCTCTGAGTGGAGTGGGAACACTGCAGCAAGTGCAGGTGCCAATCATCTCGTCGTCTTCCTGTCAGTTGATGTACGACCTTAACCCATCGGAGAAAGTGGACATCCGTTCTGACATGATTTGTGCCGGTTATCAAGAGGGGGGCAAGGACTCCTGTCAGGGGGACTCTGGAGGACCCCTGGTCTGCCAGATGGTGAACGGAACCTGGGTGCAGGCTGGGGTGGTGAGTTTTGGCCTGGGCTGTGCCCATGCCAACCACCCCGGCGTCTACGCCAAGGTGTCCACCTTCTCCAGCTTCATCCAAAGCAACATACCAGAGATCAGTCTGTATGGCCGGGTCGGTCCCAACTGGGCCAGCTCCCTGACAGTGCTGGCTAGCTCCCTGGCCACTTTACTGATGGGCCAGCTGCTAAGATAGGGCTTCCTAAAAGAGCCAGATCTTAAAGGGACATTCTATGTAATTTGCCATGAACCTGGTTTTACACTTAACTTGGCTGTAGTAGATTACTGTTTTAGGTAATATTCTGCTTAATTTTTTATTTACCATATTAATAACATGCCAAAACAACTTTTTGACCAAACTGACTCAAAATGTGACCACTTATTTCCCACGTAAGCAGAAATTCCGTCTTTCTGGTTCAAGATGCGTGTAAAACCAGGTAAATGTGTCAAATTTCAAAGGAATTTTGCTTTAAAGGAAAGGGCCGAACCTGTGGTGGCAAACTATACTACGTTTTAATATGTATATGCAACTCCTAACAAATTCAAGTGATTCTGAATATACAAGATATCGCTAATCAGCAGATAAAACGGTGATATTATGGGTATTTAGAACGAATGAAATGTAAAGCCATGTTTGTCGATCTATTTTAGCACATTTTAACATGTCATGTAAAATGTAACATCAAGTTTCTTTATAATTTTGAATgaatgtaaataaatgattacAAATGTCAGTCATTTATAAGAACTGTCACTTA

Function

GO: NA

KEGG:

id description
K08664 PRSS8; prostasin

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU335887 lncRNA downstream 18162 73721161 ~ 73721509 (-) True G296072
TU335886 lncRNA downstream 19318 73720108 ~ 73720353 (-) True G296071
TU335884 lncRNA downstream 22210 73717172 ~ 73717461 (-) True G296069
TU335883 lncRNA downstream 22878 73716305 ~ 73716793 (-) True G296068
TU335871 lncRNA downstream 40110 73697713 ~ 73699561 (-) True G296057
TU335924 lncRNA upstream 10887 73770621 ~ 73810436 (-) False G296101
TU335923 lncRNA upstream 50151 73809885 ~ 73810436 (-) True G296101
TU335957 lncRNA upstream 52220 73811954 ~ 73813130 (-) True G296117
TU335961 lncRNA upstream 57788 73817522 ~ 73818469 (-) True G296120
TU335970 lncRNA upstream 64458 73824192 ~ 73824664 (-) True G296129
XM_036975135.1 mRNA downstream 42309 73661996 ~ 73697362 (-) False LOC110520558
XM_036975143.1 mRNA downstream 42309 73661996 ~ 73697362 (-) False LOC110520558
XM_036975126.1 mRNA downstream 42334 73661996 ~ 73697337 (-) False LOC110520558
XM_036975127.1 mRNA downstream 42334 73661996 ~ 73697337 (-) False LOC110520558
XM_036975128.1 mRNA downstream 42334 73661996 ~ 73697337 (-) False LOC110520558
XM_021597956.2 mRNA upstream 92350 73852084 ~ 73867970 (-) False LOC110520571
XM_021597957.2 mRNA upstream 92350 73852084 ~ 73868375 (-) True LOC110520571
XM_021597959.2 mRNA upstream 110755 73870489 ~ 73877384 (-) False LOC110520572
XM_021597958.2 mRNA upstream 110755 73870489 ~ 73877576 (-) False LOC110520572
XM_021597963.2 mRNA upstream 123807 73883541 ~ 73889222 (-) True LOC110520575
TU335855 other downstream 106635 73632038 ~ 73633036 (-) False G296043
TU335849 other downstream 106635 73632304 ~ 73633036 (-) True G296043
TU335813 other downstream 166760 73572292 ~ 73572911 (-) True G296011
TU334351 other downstream 858817 72876339 ~ 72880854 (-) True LOC110520539
TU334284 other downstream 963064 72775407 ~ 72776607 (-) True G294697
TU335926 other upstream 13420 73773154 ~ 73775299 (-) False G296102
TU335928 other upstream 13420 73773154 ~ 73775299 (-) True G296102
TU335922 other upstream 48748 73808482 ~ 73809596 (-) True G296100
TU336010 other upstream 113239 73872973 ~ 73873817 (-) True LOC110520572
TU336013 other upstream 117985 73877719 ~ 73880371 (-) True G296166

Expression Profile