RNA id: LOC118964353



Basic Information


Item Value
RNA id LOC118964353
length 110
RNA type mRNA
GC content 0.55
exon number 1
gene id LOC118964353
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73974330 ~ 73974439 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gcttacggccataccagcctgaatacgccctgatctcggaagctaaacAGGattgggcctggttagtacttggatgggagaccgcctgggaataccaggtgctgcaAGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU336001 lncRNA downstream 9458 73963300 ~ 73964872 (-) False LOC110520576
TU335996 lncRNA downstream 15343 73957970 ~ 73958987 (-) True G296151
TU335993 lncRNA downstream 18283 73954904 ~ 73956047 (-) True G296148
TU335999 lncRNA downstream 22228 73951026 ~ 73952102 (-) True G296152
TU335998 lncRNA downstream 22775 73950507 ~ 73951555 (-) False G296152
TU336060 lncRNA upstream 3172 73977611 ~ 73977948 (-) True G296203
TU336066 lncRNA upstream 8663 73983102 ~ 73983378 (-) True G296206
TU336073 lncRNA upstream 34880 74009319 ~ 74009676 (-) True G296213
TU336133 lncRNA upstream 136517 74110956 ~ 74113300 (-) True G296267
TU336162 lncRNA upstream 192123 74166562 ~ 74167156 (-) True G296295
XR_005051411.1 mRNA downstream 715 73973452 ~ 73973615 (-) True LOC118964355
XR_005051379.1 mRNA downstream 929 73960416 ~ 73973401 (-) False LOC110520576
XR_005051378.1 mRNA downstream 929 73963603 ~ 73973401 (-) False LOC110520576
XM_021597963.2 mRNA downstream 85108 73883541 ~ 73889222 (-) True LOC110520575
XM_021597958.2 mRNA downstream 96754 73870489 ~ 73877576 (-) False LOC110520572
XR_005051412.1 mRNA upstream 2941 73977380 ~ 73977551 (-) True LOC118964361
XM_021597964.2 mRNA upstream 11462 73985901 ~ 74028822 (-) True LOC110520577
XM_021597965.2 mRNA upstream 130081 74104520 ~ 74107240 (-) True LOC100136284
XM_036975206.1 mRNA upstream 191079 74165518 ~ 74246111 (-) False LOC110504742
XM_036975194.1 mRNA upstream 191079 74165518 ~ 74438683 (-) False LOC110504742
TU336000 other downstream 2500 73970482 ~ 73971830 (-) True LOC110520576
TU336013 other downstream 93959 73877719 ~ 73880371 (-) True G296166
TU336010 other downstream 100513 73872973 ~ 73873817 (-) True LOC110520572
TU335922 other downstream 164734 73808482 ~ 73809596 (-) True G296100
TU335928 other downstream 199031 73773154 ~ 73775299 (-) True G296102
TU336182 other upstream 264748 74239187 ~ 74239795 (-) True G296315
TU338161 other upstream 1986108 75960547 ~ 75963074 (-) True G298065
TU338234 other upstream 2080682 76055121 ~ 76057006 (-) True G298131
TU338309 other upstream 2191564 76166003 ~ 76166401 (-) True G298192
TU339219 other upstream 2808404 76782843 ~ 76787731 (-) True G299024