RNA id: XM_036975328.1


Basic Information

Item Value
RNA id XM_036975328.1
length 2164
RNA type mRNA
GC content 0.54
exon number 13
gene id slc23a3
representative False

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 81967130 ~ 81979522 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TCCTGGGTCAAAGTTCACCTAGGACATAAGAGAGGGGACAGAATTCCTACACGTTTCAGCTGgtcctctgttgttgttgtggtagtggttTTGCAGCTGATGAGTTGAAGaccgagagcaagagagagagagggagtgagagagagaggagtgagaaaaaaagcgagtgagagagagggagtgagaagaaaagcgagtgagagagagagagagagagagagaaggaaatctGTATTCATGTAAGGAGTTTTGACAAGAAGACAACAGCCGTGTATGATAATGGATGCAGGTCAGCGTTTTGACCCCGAGCTTCCTGACGAAACCAGAAGCACCAGCAACACAGATATCGCAAGTGTGAACCAACATCCACCCTGCTTTCTAAACCTGCTGTTGGCGGTACAGcatgTGTTTGTGCAGTGCTCTCTGCTGGTTCTGGTCCTCGGTGTGTTGCAGCAACATCTACTGttacaggatggagagagagagaggttactgtcctccatgttgttctACTCCGCTCTCTCCACTCTGATACAGAGCTGTCTGGGGACATGCCTCCCTCTGGTCCAGGCTCCATCTCTGGAAACCCTGATCCCTGCTGTAGTCCTCACTGCCCAGATTGTTACTGAACCGGCCTGCAGAGGGCACtgtgaggagagtgaggaggacATCCTGCCCAGAGCCAACCCAGTCAGAGAGCTCCAGGGTATGACTGTGATAGTGGGCATGGTCCAGCTGGTTCTGGGTGTGACAGGTCTGAGTGGTGTGGTTCTGAGACACTGTGGTCCGCTGGTCATAGCCCCTCTGTTGTGTCTACTGGGCTTCTCCATCTACAGAgaggctgctctgctctgctcagacCACTGGGCCATCGCTGCACTGACAGTCATCCTCCTAGTGCTCCTGTCCCAGCATCTACGCTCCTACATGCTCCCAGCATGCCTCAGCATGCCtcagctgcctgtctgcaggatgctcTCTTTGCTGCTTCCCCTACTGAGTGTGTGGGCTCTGTGTGAAGTCTTGGAGAGTTTTGGGGTTTTACGTCTTCGTTCCGTCTCCGAGCTGCTGCCGGCACTGAAGACGAGCAACACTTCCCTTCCCGAACTTTTACGGTCGGACCCCTTCACTGTGCCGTGGCTCAGTCCCCCTCTGGCAGctgaGATAGGTCTACCCCTGCTGTCAGTTCGAGGCATGGCGGCTGGTGTCGTTgcagccctctcctcctctgtcagttcAGTGGGGATGTACCTGCTAACGGCCCGGCTCCTGGGAGTCCCCCCTCCCCCCGCAGCAGCCTGTAACAGGGGCCTTGGGTCCCAGGGTCTTGGCAGTGTGGTGGCTGGCCTGATGGGGGCGCCACTGGGGCTCAGCAGCAGTGTCCCCAACACCTGTACTCTTGGACTCAGCCAGtctgGGTCCAGGTGGACAGTGCAACTGGCAGCCATCTTGGGACTGGCCCTAGGAGTGTCGCCTCGACTGACACAGCTCATCACTTCTGTCCCCTTGGCCATCTACGGTGCTCTTCTCAGTGTAACGTACACTATTGCCGTGGCTACAGGTGTGAGGTACTTCCAGTTCACGCACATCGACTCTGGTCGTAACATCTTCAACATCGGCTTGGCTGTCTTCATGTCTCTAGTGCTGCCTCACTGGTTCCTCATGCAGACCGTCTTTATTAACACTGGTATGGTCAGTGTTGATGTCCTTCTCCATTCTCTTCTGACCTCACCTGTGCTCCTGGTGGGCATCCTGGCTTTCCTATTGGACAATACAGTATCGGGGTCTTCATCGGAGAGAGGACTTGACTCAGCGGAGATGGAGAAGACAGGATGGACATCAGTCAACAGTGAGCCAGGGTATCACCAGGAAGTGGAGTTAATTTACGAGTCCCCTTATCTCCTGAGAAGACTGTGGAAGTTACCTTGGTTACGGACGGCCCCCTTCTCTGCCTGTAGGATCACAGATGATGGAGACGTACTGTAGAGTCCCGTCGGAGGACAacgctgttcctgttcCGCTTCATGTCCGTCAGTTATTaaaccttcactccctctacctgcttctcatctcttgCATCGAtccttccaggtgactacctcatgaagctggttgagagaatgtgcaaagctgtcatcaaggcaaaaattggttacattgaaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU344451 lncRNA downstream 62320 81904536 ~ 81904810 (-) True G303534
TU344441 lncRNA downstream 77242 81888759 ~ 81889888 (-) False G303526
TU344442 lncRNA downstream 77242 81888759 ~ 81889888 (-) True G303526
TU344438 lncRNA downstream 78961 81887934 ~ 81888169 (-) True G303523
TU344420 lncRNA downstream 131079 81833637 ~ 81836051 (-) False G303510
TU344637 lncRNA upstream 3444 81982966 ~ 82019757 (-) True G303659
TU344639 lncRNA upstream 4655 81984177 ~ 81985757 (-) True G303660
TU344652 lncRNA upstream 7584 81987106 ~ 81989795 (-) False G303662
TU344658 lncRNA upstream 7584 81987106 ~ 81991599 (-) False G303662
TU344641 lncRNA upstream 7916 81987438 ~ 81991599 (-) False G303662
XM_021598650.2 mRNA downstream 79411 81876621 ~ 81887719 (-) True si:dkey-69o16.5
XM_036975305.1 mRNA downstream 928763 81012098 ~ 81038367 (-) False LOC110520656
XM_036975306.1 mRNA downstream 928763 81012098 ~ 81038367 (-) True LOC110520656
XM_036975309.1 mRNA downstream 982747 80979138 ~ 80984383 (-) True LOC110520654
XM_036975310.1 mRNA downstream 1058781 80905040 ~ 80908349 (-) True LOC110520653
XM_036975332.1 mRNA upstream 14529 81994051 ~ 82038179 (-) False LOC110510426
XM_036975330.1 mRNA upstream 14529 81994051 ~ 82040699 (-) False LOC110510426
XM_036975331.1 mRNA upstream 14529 81994051 ~ 82040699 (-) True LOC110510426
XR_005051397.1 mRNA upstream 43313 82022835 ~ 82023180 (-) True LOC118964332
XR_005051398.1 mRNA upstream 43757 82023279 ~ 82023723 (-) True LOC118964333
TU343486 other downstream 1244507 80721738 ~ 80722623 (-) True G302725
TU343484 other downstream 1245449 80720717 ~ 80721681 (-) True G302724
TU343413 other downstream 1283944 80680986 ~ 80683186 (-) True G302660
TU343054 other downstream 1458833 80507935 ~ 80508297 (-) True G302399
TU343001 other downstream 1545985 80419350 ~ 80421145 (-) True LOC110520645
TU344665 other upstream 41866 82021388 ~ 82022265 (-) True G303663
TU344667 other upstream 43307 82022829 ~ 82023451 (-) True G303665
TU344968 other upstream 318234 82297756 ~ 82314081 (-) True pard3bb
TU345254 other upstream 765722 82745244 ~ 82747738 (-) True LOC110505453
TU345368 other upstream 851848 82831370 ~ 82851751 (-) False G304204

Expression Profile