RNA id: TU244085


Basic Information

Item Value
RNA id TU244085
length 585
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G214609
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 124105 ~ 125144 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GACCTAGGGCTAACATTGCTAATATTCAGGTAGATGTGTTGTGTATTTCAACATTAGGACCTCGGGCTAACACTGCTAATATTCAGGTAGATGTGTTGTGTATTTCAACATTAGGACCTAGGGCTAACACTGCTAATATTCAGGTAGATGTGTTGTGTATTCAACATTAGGACCTCGGGCTAACACTGCTAATATTCAGGTAGATGTGTTGTGTATTCAACATTAGGACCTAGGGCTAACACTGCTAATATTCAGGTAGATATGTTGTGTATTTCAACATTAGGACCTCGGGCTAACACTGCTAATATTCAGGTAGATATGTTGTGTATTTCAACATTAGGACCTCGGGCTAACACTGCTAATATTCAGGTAGATGTGTTGTGTATTCAACATTAGGACCTAGGGCTAACATTGCTAATATTCAGGTAGATGTGTTGTGTATTTCAACATTAGGACCTCGGGCTAACACTGCTAAAATGTGTTGGTTTTCATCTGTAACAAGTTTATCCAGTTtaacagaaataatcactttggCAAATGAAGGGACATTTACACATTTCTCTTCATTGTCAAACACATGTATTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU244071 lncRNA downstream 13760 109354 ~ 110345 (-) True G214599
TU244069 lncRNA downstream 15486 108021 ~ 108619 (-) True G214597
TU243988 lncRNA downstream 72077 46388 ~ 52028 (-) True G214545
TU243979 lncRNA downstream 73721 41654 ~ 50384 (-) False G214545
TU243992 lncRNA downstream 89018 29481 ~ 35087 (-) True G214549
TU244091 lncRNA upstream 185 125329 ~ 125719 (-) True G214614
TU244093 lncRNA upstream 704 125848 ~ 129206 (-) True G214615
TU244105 lncRNA upstream 11648 136792 ~ 137029 (-) True G214627
TU244137 lncRNA upstream 39500 164644 ~ 164864 (-) True G214651
TU244194 lncRNA upstream 82523 207667 ~ 208245 (-) True G214690
XM_036975416.1 mRNA downstream 49552 63916 ~ 74553 (-) False LOC118964342
XM_036965278.1 mRNA upstream 22596 147740 ~ 155571 (-) True irx4a
XR_005040024.1 mRNA upstream 123894 249038 ~ 250513 (-) False LOC118944729
XR_005040030.1 mRNA upstream 123894 249038 ~ 250513 (-) False LOC118944729
XR_005040023.1 mRNA upstream 123894 249038 ~ 250548 (-) False LOC118944729
XM_036965290.1 mRNA upstream 385823 510967 ~ 515209 (-) True irx2a
TU244046 other downstream 49554 70094 ~ 74551 (-) True LOC118964342
TU244156 other upstream 52579 177723 ~ 179591 (-) False G214663
TU244157 other upstream 52579 177723 ~ 178387 (-) False G214663
TU244160 other upstream 52579 177723 ~ 179591 (-) True G214663
TU244568 other upstream 355903 481047 ~ 481609 (-) True G214982
TU245090 other upstream 790815 915959 ~ 919673 (-) True G215354

Expression Profile