RNA id: TU244091


Basic Information

Item Value
RNA id TU244091
length 335
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G214614
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 125329 ~ 125719 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TGTAGGTACTGTACCAAGATTATGTGTATGTCAGTCATGGGCCAAAAGCTTATACAAAATGATCATTGATAAATTAAAGCTGCTAATATTCAGGTAGATATGTTGTGTATTTCAACATTAGGACCTAGGGCTAACACTGCTAATATTCAGGTAGATATGTTGTGTATTTCAACATTAGGACCTCGGGCTAACACTGCTAATATTCAGGTAGATATGTTGTGTATTTCAACATTAGGACCTCGGGCTAACACTGCTAATATTCAGGTAGATGTGTTGTGTATTTCAACATTAGGACCTAGGGCTAACACTGCTAATATTCAGGTAGATATGTTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU244085 lncRNA downstream 185 124105 ~ 125144 (-) True G214609
TU244084 lncRNA downstream 513 124105 ~ 124816 (-) False G214609
TU244071 lncRNA downstream 14984 109354 ~ 110345 (-) True G214599
TU244069 lncRNA downstream 16710 108021 ~ 108619 (-) True G214597
TU243988 lncRNA downstream 73301 46388 ~ 52028 (-) True G214545
TU244093 lncRNA upstream 129 125848 ~ 129206 (-) True G214615
TU244105 lncRNA upstream 11073 136792 ~ 137029 (-) True G214627
TU244137 lncRNA upstream 38925 164644 ~ 164864 (-) True G214651
TU244194 lncRNA upstream 81948 207667 ~ 208245 (-) True G214690
TU244290 lncRNA upstream 121434 247153 ~ 250441 (-) False LOC118944729
XM_036975416.1 mRNA downstream 50776 63916 ~ 74553 (-) False LOC118964342
XM_036965278.1 mRNA upstream 22021 147740 ~ 155571 (-) True irx4a
XR_005040024.1 mRNA upstream 123319 249038 ~ 250513 (-) False LOC118944729
XR_005040030.1 mRNA upstream 123319 249038 ~ 250513 (-) False LOC118944729
XR_005040023.1 mRNA upstream 123319 249038 ~ 250548 (-) False LOC118944729
XM_036965290.1 mRNA upstream 385248 510967 ~ 515209 (-) True irx2a
TU244046 other downstream 50778 70094 ~ 74551 (-) True LOC118964342
TU244156 other upstream 52004 177723 ~ 179591 (-) False G214663
TU244157 other upstream 52004 177723 ~ 178387 (-) False G214663
TU244160 other upstream 52004 177723 ~ 179591 (-) True G214663
TU244568 other upstream 355328 481047 ~ 481609 (-) True G214982
TU245090 other upstream 790240 915959 ~ 919673 (-) True G215354

Expression Profile