Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU244534 |
| length | 307 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 1 |
| gene id | G214952 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 458332 ~ 458638 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU244510 | lncRNA | downstream | 18700 | 438420 ~ 439632 (-) | True | G214931 |
| TU244489 | lncRNA | downstream | 32356 | 425303 ~ 425976 (-) | True | G214917 |
| TU244468 | lncRNA | downstream | 43927 | 409895 ~ 414405 (-) | True | G214900 |
| TU244465 | lncRNA | downstream | 50336 | 406124 ~ 407996 (-) | True | G214898 |
| TU244450 | lncRNA | downstream | 56682 | 401398 ~ 401650 (-) | True | G214891 |
| TU244547 | lncRNA | upstream | 9458 | 468096 ~ 468526 (-) | True | G214963 |
| TU244562 | lncRNA | upstream | 17537 | 476175 ~ 476663 (-) | True | G214976 |
| TU244571 | lncRNA | upstream | 23359 | 481997 ~ 484724 (-) | True | G214984 |
| TU244576 | lncRNA | upstream | 29848 | 488486 ~ 489130 (-) | True | G214989 |
| TU244588 | lncRNA | upstream | 33840 | 492478 ~ 495223 (-) | False | G214992 |
| XR_005040023.1 | mRNA | downstream | 207784 | 249038 ~ 250548 (-) | False | LOC118944729 |
| XR_005040024.1 | mRNA | downstream | 207819 | 249038 ~ 250513 (-) | False | LOC118944729 |
| XR_005040030.1 | mRNA | downstream | 207819 | 249038 ~ 250513 (-) | False | LOC118944729 |
| XM_036965278.1 | mRNA | downstream | 302761 | 147740 ~ 155571 (-) | True | irx4a |
| XM_036975416.1 | mRNA | downstream | 383779 | 63916 ~ 74553 (-) | False | LOC118964342 |
| XM_036965290.1 | mRNA | upstream | 52329 | 510967 ~ 515209 (-) | True | irx2a |
| XM_036975420.1 | mRNA | upstream | 420362 | 879000 ~ 881031 (-) | True | LOC118964345 |
| XM_036965348.1 | mRNA | upstream | 1113039 | 1571677 ~ 1581702 (-) | False | LOC118936608 |
| XR_005040037.1 | mRNA | upstream | 1115726 | 1574364 ~ 1575575 (-) | True | LOC118944736 |
| XM_036965320.1 | mRNA | upstream | 1124478 | 1583116 ~ 1593615 (-) | False | LOC118944735 |
| TU244156 | other | downstream | 278741 | 177723 ~ 179591 (-) | False | G214663 |
| TU244160 | other | downstream | 278741 | 177723 ~ 179591 (-) | True | G214663 |
| TU244157 | other | downstream | 279945 | 177723 ~ 178387 (-) | False | G214663 |
| TU244046 | other | downstream | 383781 | 70094 ~ 74551 (-) | True | LOC118964342 |
| TU244568 | other | upstream | 22409 | 481047 ~ 481609 (-) | True | G214982 |
| TU245090 | other | upstream | 457321 | 915959 ~ 919673 (-) | True | G215354 |
| TU245901 | other | upstream | 1141588 | 1600226 ~ 1618140 (-) | True | G215950 |
| TU245911 | other | upstream | 1200442 | 1659080 ~ 1682022 (-) | True | G215956 |
| TU245913 | other | upstream | 1203051 | 1661689 ~ 1663067 (-) | False | LOC110519742 |
