Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU244678 |
| length | 422 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G215054 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 558161 ~ 558733 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU244674 | lncRNA | downstream | 1254 | 556661 ~ 556907 (-) | True | G215050 |
| TU244666 | lncRNA | downstream | 11542 | 546121 ~ 546619 (-) | True | G215043 |
| TU244616 | lncRNA | downstream | 48249 | 509593 ~ 509912 (-) | True | G215005 |
| TU244590 | lncRNA | downstream | 60498 | 497366 ~ 497663 (-) | True | G214994 |
| TU244588 | lncRNA | downstream | 62938 | 492478 ~ 495223 (-) | False | G214992 |
| TU244689 | lncRNA | upstream | 11444 | 570177 ~ 570433 (-) | True | G215065 |
| TU244711 | lncRNA | upstream | 26792 | 585525 ~ 586249 (-) | False | G215074 |
| TU244713 | lncRNA | upstream | 26792 | 585525 ~ 586249 (-) | True | G215074 |
| TU244717 | lncRNA | upstream | 34226 | 592959 ~ 593677 (-) | True | G215076 |
| TU244746 | lncRNA | upstream | 61764 | 620497 ~ 622181 (-) | True | G215098 |
| XM_036965290.1 | mRNA | downstream | 42952 | 510967 ~ 515209 (-) | True | irx2a |
| XR_005040023.1 | mRNA | downstream | 307613 | 249038 ~ 250548 (-) | False | LOC118944729 |
| XR_005040024.1 | mRNA | downstream | 307648 | 249038 ~ 250513 (-) | False | LOC118944729 |
| XR_005040030.1 | mRNA | downstream | 307648 | 249038 ~ 250513 (-) | False | LOC118944729 |
| XM_036965278.1 | mRNA | downstream | 402590 | 147740 ~ 155571 (-) | True | irx4a |
| XM_036975420.1 | mRNA | upstream | 320267 | 879000 ~ 881031 (-) | True | LOC118964345 |
| XM_036965348.1 | mRNA | upstream | 1012944 | 1571677 ~ 1581702 (-) | False | LOC118936608 |
| XR_005040037.1 | mRNA | upstream | 1015631 | 1574364 ~ 1575575 (-) | True | LOC118944736 |
| XM_036965320.1 | mRNA | upstream | 1024383 | 1583116 ~ 1593615 (-) | False | LOC118944735 |
| XM_036965332.1 | mRNA | upstream | 1024383 | 1583116 ~ 1593615 (-) | True | LOC118944735 |
| TU244568 | other | downstream | 76552 | 481047 ~ 481609 (-) | True | G214982 |
| TU244156 | other | downstream | 378570 | 177723 ~ 179591 (-) | False | G214663 |
| TU244160 | other | downstream | 378570 | 177723 ~ 179591 (-) | True | G214663 |
| TU244157 | other | downstream | 379774 | 177723 ~ 178387 (-) | False | G214663 |
| TU244046 | other | downstream | 483610 | 70094 ~ 74551 (-) | True | LOC118964342 |
| TU245090 | other | upstream | 357226 | 915959 ~ 919673 (-) | True | G215354 |
| TU245901 | other | upstream | 1041493 | 1600226 ~ 1618140 (-) | True | G215950 |
| TU245911 | other | upstream | 1100347 | 1659080 ~ 1682022 (-) | True | G215956 |
| TU245913 | other | upstream | 1102956 | 1661689 ~ 1663067 (-) | False | LOC110519742 |
| TU245915 | other | upstream | 1368011 | 1926744 ~ 1952588 (-) | True | LOC110516567 |
