Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU245732 |
| length | 295 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G215813 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 1581980 ~ 1582274 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU245728 | lncRNA | downstream | 5064 | 1573282 ~ 1576916 (-) | True | LOC118936608 |
| TU245720 | lncRNA | downstream | 48054 | 1523294 ~ 1533926 (-) | False | G215806 |
| TU245721 | lncRNA | downstream | 48054 | 1532900 ~ 1533926 (-) | True | G215806 |
| TU245724 | lncRNA | downstream | 50990 | 1521400 ~ 1530990 (-) | True | G215807 |
| TU245717 | lncRNA | downstream | 63775 | 1491111 ~ 1518205 (-) | True | G215804 |
| TU245896 | lncRNA | upstream | 13044 | 1595318 ~ 1676448 (-) | True | G215946 |
| TU245903 | lncRNA | upstream | 48507 | 1630781 ~ 1631524 (-) | False | G215951 |
| TU245905 | lncRNA | upstream | 48507 | 1630781 ~ 1642993 (-) | True | G215951 |
| TU245909 | lncRNA | upstream | 62880 | 1645154 ~ 1719959 (-) | True | G215954 |
| TU245914 | lncRNA | upstream | 88557 | 1670831 ~ 1673535 (-) | True | LOC110519742 |
| XM_036965348.1 | mRNA | downstream | 278 | 1571677 ~ 1581702 (-) | False | LOC118936608 |
| XR_005040037.1 | mRNA | downstream | 6405 | 1574364 ~ 1575575 (-) | True | LOC118944736 |
| XM_036975420.1 | mRNA | downstream | 700949 | 879000 ~ 881031 (-) | True | LOC118964345 |
| XM_036965290.1 | mRNA | downstream | 1066771 | 510967 ~ 515209 (-) | True | irx2a |
| XR_005040023.1 | mRNA | downstream | 1331432 | 249038 ~ 250548 (-) | False | LOC118944729 |
| XM_036965320.1 | mRNA | upstream | 842 | 1583116 ~ 1593615 (-) | False | LOC118944735 |
| XM_036965332.1 | mRNA | upstream | 842 | 1583116 ~ 1593615 (-) | True | LOC118944735 |
| XR_005040038.1 | mRNA | upstream | 24767 | 1607041 ~ 1609598 (-) | True | LOC118944737 |
| XM_036965374.1 | mRNA | upstream | 79386 | 1661660 ~ 1673583 (-) | False | LOC110519742 |
| XM_036965376.1 | mRNA | upstream | 79386 | 1661660 ~ 1673583 (-) | False | LOC110519742 |
| TU245090 | other | downstream | 662307 | 915959 ~ 919673 (-) | True | G215354 |
| TU244568 | other | downstream | 1100371 | 481047 ~ 481609 (-) | True | G214982 |
| TU244156 | other | downstream | 1402389 | 177723 ~ 179591 (-) | False | G214663 |
| TU245901 | other | upstream | 17952 | 1600226 ~ 1618140 (-) | True | G215950 |
| TU245911 | other | upstream | 76806 | 1659080 ~ 1682022 (-) | True | G215956 |
| TU245913 | other | upstream | 79415 | 1661689 ~ 1663067 (-) | False | LOC110519742 |
| TU245915 | other | upstream | 344470 | 1926744 ~ 1952588 (-) | True | LOC110516567 |
| TU246015 | other | upstream | 475641 | 2057915 ~ 2058429 (-) | True | G216038 |
