Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU245835 |
| length | 424 |
| lncRNA type | intronic |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G215894 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 2013867 ~ 2014326 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU245776 | lncRNA | upstream | 187920 | 1819422 ~ 1825947 (+) | False | LOC118944761 |
| TU245775 | lncRNA | upstream | 187920 | 1825166 ~ 1825947 (+) | True | LOC118944761 |
| TU245755 | lncRNA | upstream | 331837 | 1659224 ~ 1682030 (+) | True | G215828 |
| TU245735 | lncRNA | upstream | 344289 | 1589307 ~ 1669578 (+) | True | G215815 |
| TU245695 | lncRNA | upstream | 482867 | 1522163 ~ 1531000 (+) | False | G215792 |
| TU245841 | lncRNA | downstream | 8759 | 2023085 ~ 2023300 (+) | True | G215900 |
| TU245845 | lncRNA | downstream | 16434 | 2030760 ~ 2030962 (+) | True | G215904 |
| TU245847 | lncRNA | downstream | 17824 | 2032150 ~ 2032404 (+) | True | G215906 |
| TU245851 | lncRNA | downstream | 23574 | 2037900 ~ 2038204 (+) | True | G215910 |
| TU245852 | lncRNA | downstream | 23949 | 2038275 ~ 2038516 (+) | True | G215911 |
| XM_036965551.1 | mRNA | upstream | 26387 | 1960781 ~ 1987480 (+) | False | ahr1a |
| LOC118944758 | mRNA | upstream | 128961 | 1882585 ~ 1884906 (+) | True | LOC118944758 |
| LOC118944757 | mRNA | upstream | 135783 | 1875760 ~ 1878084 (+) | True | LOC118944757 |
| XM_036965491.1 | mRNA | upstream | 150641 | 1860933 ~ 1863226 (+) | True | LOC118944756 |
| XM_036965516.1 | mRNA | upstream | 186368 | 1824933 ~ 1827499 (+) | False | LOC118944761 |
| XM_036965575.1 | mRNA | downstream | 48672 | 2062998 ~ 2123904 (+) | False | LOC110513668 |
| XM_036965567.1 | mRNA | downstream | 48674 | 2063000 ~ 2123904 (+) | False | LOC110513668 |
| XM_036965563.1 | mRNA | downstream | 48676 | 2063002 ~ 2123904 (+) | False | LOC110513668 |
| XM_036965557.1 | mRNA | downstream | 48678 | 2063004 ~ 2123904 (+) | False | LOC110513668 |
| XM_036965586.1 | mRNA | downstream | 49482 | 2063808 ~ 2123904 (+) | False | LOC110513668 |
| TU245815 | other | upstream | 28071 | 1984983 ~ 1985796 (+) | True | ahr1a |
| TU245816 | other | upstream | 47815 | 1960868 ~ 1966052 (+) | False | ahr1a |
| TU245773 | other | upstream | 208612 | 1804388 ~ 1805255 (+) | True | G215843 |
| TU245758 | other | upstream | 266585 | 1670411 ~ 1747282 (+) | True | G215830 |
| TU245747 | other | upstream | 333760 | 1635598 ~ 1680107 (+) | False | LOC118944469 |
| TU246414 | other | downstream | 446891 | 2461217 ~ 2462744 (+) | True | G216353 |
| TU246526 | other | downstream | 558069 | 2572395 ~ 2574899 (+) | False | G216438 |
| TU246778 | other | downstream | 1002838 | 3017164 ~ 3019834 (+) | False | LOC110506718 |
| TU246775 | other | downstream | 1025660 | 3039986 ~ 3041517 (+) | True | G216640 |
| TU246830 | other | downstream | 1092028 | 3106354 ~ 3108233 (+) | False | G216673 |
