Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU253727 |
| length | 217 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G222218 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 9312997 ~ 9313213 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU253718 | lncRNA | upstream | 12388 | 9300356 ~ 9300609 (+) | True | G222212 |
| TU253717 | lncRNA | upstream | 12768 | 9300016 ~ 9300229 (+) | True | G222211 |
| TU253715 | lncRNA | upstream | 16602 | 9296177 ~ 9296395 (+) | True | G222209 |
| TU253714 | lncRNA | upstream | 19090 | 9293641 ~ 9293907 (+) | True | G222208 |
| TU253710 | lncRNA | upstream | 26892 | 9285463 ~ 9286105 (+) | True | G222204 |
| TU253756 | lncRNA | downstream | 34276 | 9347489 ~ 9348696 (+) | False | G222246 |
| TU253757 | lncRNA | downstream | 34276 | 9347489 ~ 9360744 (+) | True | G222246 |
| TU253788 | lncRNA | downstream | 91995 | 9405208 ~ 9405735 (+) | True | G222275 |
| TU253789 | lncRNA | downstream | 92835 | 9406048 ~ 9406382 (+) | True | G222276 |
| TU253794 | lncRNA | downstream | 103780 | 9416993 ~ 9417202 (+) | True | G222281 |
| LOC110520813 | mRNA | upstream | 325151 | 8982594 ~ 8987846 (+) | False | LOC110520813 |
| XM_036967958.1 | mRNA | upstream | 374299 | 8932771 ~ 8938698 (+) | True | LOC110517169 |
| XR_005040472.1 | mRNA | upstream | 386940 | 8898021 ~ 8926057 (+) | True | LOC118945318 |
| LOC110520801 | mRNA | upstream | 400687 | 8906566 ~ 8912310 (+) | False | LOC110520801 |
| LOC110516768 | mRNA | upstream | 434344 | 8865764 ~ 8878653 (+) | False | LOC110516768 |
| XM_036968162.1 | mRNA | downstream | 150124 | 9463337 ~ 9483086 (+) | False | LOC110520819 |
| XM_036968160.1 | mRNA | downstream | 150125 | 9463338 ~ 9483086 (+) | True | LOC110520819 |
| XM_036963772.1 | mRNA | downstream | 172387 | 9485600 ~ 9486125 (+) | True | LOC118944441 |
| XM_036968166.1 | mRNA | downstream | 177120 | 9490333 ~ 9508263 (+) | False | LOC110520820 |
| XM_036968170.1 | mRNA | downstream | 177121 | 9490334 ~ 9508263 (+) | False | LOC110520820 |
| TU253587 | other | upstream | 244846 | 9067146 ~ 9068151 (+) | True | G222102 |
| TU253570 | other | upstream | 277164 | 9035358 ~ 9035833 (+) | True | G222089 |
| TU252851 | other | upstream | 404269 | 8906618 ~ 8908728 (+) | True | G221526 |
| TU252867 | other | upstream | 449021 | 8861500 ~ 8863976 (+) | True | G221539 |
| TU252844 | other | upstream | 461434 | 8847836 ~ 8851563 (+) | False | G221525 |
| TU253800 | other | downstream | 131834 | 9445047 ~ 9445704 (+) | True | G222287 |
| TU253820 | other | downstream | 189391 | 9502604 ~ 9506786 (+) | False | LOC110520820 |
| TU253887 | other | downstream | 293092 | 9606305 ~ 9611139 (+) | True | G222345 |
| TU253897 | other | downstream | 366547 | 9679760 ~ 9681752 (+) | True | G222353 |
| TU254395 | other | downstream | 589899 | 9903112 ~ 9913098 (+) | True | sphk2 |
