RNA id: TCONS_00029166


Basic Information

Item Value
RNA id TCONS_00029166
length 1269
RNA type mRNA
GC content 0.48
exon number 7
gene id XLOC_014767
representative True

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 23592248 ~ 23594914 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTGTTCCCAGTGAATTCTGTTATTATGGCATTGAAAAGAAAGCGTTGTTCTCAAGACACTCAAGTGTATGATTTACATACTCGTACACCTCCAACATCCAGCGCCAATGTGGCTGAGAACCATTCACCTGTTGGTGTTGGTGAGGAGATTGAGATACAAGTGAGAAAGAAGAGGAGGTGGGAGAGTTTTGAAAAGCCGGTCTCCCTTTACGCTGAGGATGACAACCAATGGATGACTTTTCTCAGTGGCCAAAAGAGAAAACGAAGTTGTCACAGCTCTCATGTGAACGATTTCCATCCTCATACACCTCCGATATCCATCACCAGCCTTCAGTCCACTGATGTTGCTGAGGAAAATgagagaaagaggagaaggaCTGACAGTCCTGAAAAGCTGCTCTCCTGTAAAGTCCAGAAGTCCAGCAGCAGCTCTAGTCAGGAGGACCAGAATCCTGTTCAGATCCACAAGAAGAGTTCTGAAGGTGACATTCTGGACCAGTATGAACTCGGCAAGGAGATTGGAGAGGGAGGATTTGGCAGCGTCTATGAAGGGAAGCGCTTGGAGGATGGCCTtgagGTGGCAGTAAAAATTGCCAGAAAGCCACCGAACATGAAATACATCAACATCGCTGGTCATCCTGAGCCCCTTCCTTTAGAGATCGGCCTGTTGATACTGGCTCATAGAGGCGGCAAGGTTCCAGAGATCATTGAGCTGCTGGACTGGCAGGACCAGCAGGATCGTTACATCATGATCCTGGAACGACCTTCACCATGTGTAGATCTGTTGGACTTCATAATGTCTCTCGGCTCCATCACTGAACGCCAGGCTCAAAAGATCATGGAGCAGGCAACAACAGCGGGTCTCATGTGCTGCAGACGTGGGGTATTTCACAGAGACATAAAGCTGGAGAACCTGCTGGTCAACACTGACACGCTGGAGGTCAAGCTAATTGACTTTGGCTGTGGAGCTCTTCTCCAGGAATCTGGCTATGACAGTTTCTGTGGCACAAAGGAGTACTTCCCACCGGAGTACTACCTGGACGACGAATACCATGCAGAACCATCCACTGTATGGTCTTTAGGAGTTCTGTTATTCCTGCTGCTGTGTCAACGATTTCCTGAAGTCATGGACACGCAGAGGATCGATGATGGAAACTGGACTGAGCCTGGATTGTCAGAAGAATGCTGTGACTTGATTCAAGCTCTCCTGCAGGAAAACCCAAGCCAGCGGATTTCTCTGGAAGAAATCATTCTCCATCAATGGTTTAAG

Function

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0016310 phosphorylation biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-071003-3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDART00000132145

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00030225 lncRNA downstream 65687 23526278 ~ 23526561 (-) True XLOC_014764
TCONS_00030224 lncRNA downstream 154851 23436911 ~ 23437397 (-) True XLOC_014760
TCONS_00030223 lncRNA downstream 155761 23435958 ~ 23436487 (-) False XLOC_014760
TCONS_00030222 lncRNA downstream 180387 23410015 ~ 23411861 (-) True XLOC_014758
TCONS_00030221 lncRNA downstream 222996 23368879 ~ 23369252 (-) True XLOC_014756
TCONS_00030226 lncRNA upstream 30199 23625113 ~ 23627905 (-) False XLOC_014768
TCONS_00030227 lncRNA upstream 125355 23720269 ~ 23723983 (-) False XLOC_014772
TCONS_00030228 lncRNA upstream 125355 23720269 ~ 23726829 (-) False XLOC_014772
TCONS_00030229 lncRNA upstream 127954 23722868 ~ 23723990 (-) True XLOC_014772
TCONS_00029775 lncRNA upstream 138373 23733287 ~ 23734065 (-) True XLOC_014773
TCONS_00029165 mRNA downstream 15867 23573725 ~ 23576381 (-) True XLOC_014766
TCONS_00029164 mRNA downstream 42069 23548906 ~ 23550179 (-) True XLOC_014765
TCONS_00029163 mRNA downstream 65610 23525358 ~ 23526638 (-) False XLOC_014764
TCONS_00029162 mRNA downstream 102721 23488241 ~ 23489527 (-) True XLOC_014763
TCONS_00029161 mRNA downstream 121539 23468771 ~ 23470709 (-) True XLOC_014762
TCONS_00029167 mRNA upstream 30349 23625263 ~ 23627929 (-) True XLOC_014768
TCONS_00029168 mRNA upstream 65410 23660324 ~ 23661556 (-) True XLOC_014769
TCONS_00029169 mRNA upstream 77575 23672489 ~ 23674904 (-) True XLOC_014770
TCONS_00029170 mRNA upstream 113349 23708263 ~ 23709551 (-) True XLOC_014771
TCONS_00029171 mRNA upstream 150918 23745832 ~ 23747677 (-) True XLOC_014774
TCONS_00029155 other downstream 372653 23219477 ~ 23219595 (-) True XLOC_014753
TCONS_00029152 other downstream 462947 23128663 ~ 23129301 (-) True XLOC_014751
TCONS_00029151 other downstream 471321 23120398 ~ 23120927 (-) True XLOC_014750
TCONS_00029150 other downstream 477766 23114196 ~ 23114482 (-) True XLOC_014749
TCONS_00029149 other downstream 527410 23064025 ~ 23064838 (-) True XLOC_014748
TCONS_00029179 other upstream 302788 23897702 ~ 23918134 (-) False XLOC_014780
TCONS_00029181 other upstream 320302 23915216 ~ 23918106 (-) True XLOC_014780
TCONS_00029186 other upstream 544866 24139780 ~ 24139894 (-) True XLOC_014784
TCONS_00029188 other upstream 587861 24182775 ~ 24182891 (-) True XLOC_014787
TCONS_00029189 other upstream 592680 24187594 ~ 24188743 (-) True XLOC_014788

Expression Profile

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